Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato

The Asr gene family (named after abscicic acid [ABA], stress, ripening), exclusively present in plant genomes, is involved in transcriptional regulation. Its members are up-regulated in roots and leaves of water- or salt-stressed plants. In previous work, evidence of adaptive evolution (as inferred...

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Autores principales:	Giombini, Mariano Ignacio, Frankel, Nicolás, Iusem, Norberto Daniel, Hasson, Esteban Ruben
Publicado:	2009
Materias:	Asr genes Drought Polymorphism Selection Solanum Asr2 protein, Lycopersicon esculentum vegetable protein article gene expression regulation genetic polymorphism genetics haplotype plant gene plant genome population genetics tomato Gene Expression Regulation, Plant Genes, Plant Genetics, Population Genome, Plant Haplotypes Lycopersicon esculentum Plant Proteins Polymorphism, Genetic Lycopersicon chilense
Acceso en línea:	https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_00166707_v136_n1_p13_Giombini http://hdl.handle.net/20.500.12110/paper_00166707_v136_n1_p13_Giombini
Aporte de:	Biblioteca Digital - Facultad de Ciencias Exactas y Naturales (UBA) de Universidad de Buenos Aires

id	paper:paper_00166707_v136_n1_p13_Giombini
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spelling	paper:paper_00166707_v136_n1_p13_Giombini2023-06-08T14:38:30Z Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato Giombini, Mariano Ignacio Frankel, Nicolás Iusem, Norberto Daniel Hasson, Esteban Ruben Asr genes Drought Polymorphism Selection Solanum Asr2 protein, Lycopersicon esculentum vegetable protein article gene expression regulation genetic polymorphism genetics haplotype plant gene plant genome population genetics tomato Gene Expression Regulation, Plant Genes, Plant Genetics, Population Genome, Plant Haplotypes Lycopersicon esculentum Plant Proteins Polymorphism, Genetic Lycopersicon chilense Lycopersicon esculentum Solanum The Asr gene family (named after abscicic acid [ABA], stress, ripening), exclusively present in plant genomes, is involved in transcriptional regulation. Its members are up-regulated in roots and leaves of water- or salt-stressed plants. In previous work, evidence of adaptive evolution (as inferred from synonymous and nonsynonymous divergence rates) has been reported for Asr2 in Solanum chilense and S. arcanum, two species dwelling in habitats with different precipitation regimes. In this paper we investigate patterns of intraspecific nucleotide variation in Asr2 and the unlinked locus CT114 in S. chilense and S. arcanum. The extent of nucleotide diversity in Asr2 differed between species in more than one order of magnitude. In both species we detected evidence of non-neutral evolution, which may be ascribed to different selective regimes, potentially associated to unique climatic features, or, alternatively, to demographic events. The results are discussed in the light of demographic and selective hypotheses. © 2008 Springer Science+Business Media B.V. Fil:Giombini, M.I. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. Fil:Frankel, N. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. Fil:Iusem, N.D. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. Fil:Hasson, E. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. 2009 https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_00166707_v136_n1_p13_Giombini http://hdl.handle.net/20.500.12110/paper_00166707_v136_n1_p13_Giombini
institution	Universidad de Buenos Aires
institution_str	I-28
repository_str	R-134
collection	Biblioteca Digital - Facultad de Ciencias Exactas y Naturales (UBA)
topic	Asr genes Drought Polymorphism Selection Solanum Asr2 protein, Lycopersicon esculentum vegetable protein article gene expression regulation genetic polymorphism genetics haplotype plant gene plant genome population genetics tomato Gene Expression Regulation, Plant Genes, Plant Genetics, Population Genome, Plant Haplotypes Lycopersicon esculentum Plant Proteins Polymorphism, Genetic Lycopersicon chilense Lycopersicon esculentum Solanum
spellingShingle	Asr genes Drought Polymorphism Selection Solanum Asr2 protein, Lycopersicon esculentum vegetable protein article gene expression regulation genetic polymorphism genetics haplotype plant gene plant genome population genetics tomato Gene Expression Regulation, Plant Genes, Plant Genetics, Population Genome, Plant Haplotypes Lycopersicon esculentum Plant Proteins Polymorphism, Genetic Lycopersicon chilense Lycopersicon esculentum Solanum Giombini, Mariano Ignacio Frankel, Nicolás Iusem, Norberto Daniel Hasson, Esteban Ruben Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato
topic_facet	Asr genes Drought Polymorphism Selection Solanum Asr2 protein, Lycopersicon esculentum vegetable protein article gene expression regulation genetic polymorphism genetics haplotype plant gene plant genome population genetics tomato Gene Expression Regulation, Plant Genes, Plant Genetics, Population Genome, Plant Haplotypes Lycopersicon esculentum Plant Proteins Polymorphism, Genetic Lycopersicon chilense Lycopersicon esculentum Solanum
description	The Asr gene family (named after abscicic acid [ABA], stress, ripening), exclusively present in plant genomes, is involved in transcriptional regulation. Its members are up-regulated in roots and leaves of water- or salt-stressed plants. In previous work, evidence of adaptive evolution (as inferred from synonymous and nonsynonymous divergence rates) has been reported for Asr2 in Solanum chilense and S. arcanum, two species dwelling in habitats with different precipitation regimes. In this paper we investigate patterns of intraspecific nucleotide variation in Asr2 and the unlinked locus CT114 in S. chilense and S. arcanum. The extent of nucleotide diversity in Asr2 differed between species in more than one order of magnitude. In both species we detected evidence of non-neutral evolution, which may be ascribed to different selective regimes, potentially associated to unique climatic features, or, alternatively, to demographic events. The results are discussed in the light of demographic and selective hypotheses. © 2008 Springer Science+Business Media B.V.
author	Giombini, Mariano Ignacio Frankel, Nicolás Iusem, Norberto Daniel Hasson, Esteban Ruben
author_facet	Giombini, Mariano Ignacio Frankel, Nicolás Iusem, Norberto Daniel Hasson, Esteban Ruben
author_sort	Giombini, Mariano Ignacio
title	Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato
title_short	Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato
title_full	Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato
title_fullStr	Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato
title_full_unstemmed	Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato
title_sort	nucleotide polymorphism in the drought responsive gene asr2 in wild populations of tomato
publishDate	2009
url	https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_00166707_v136_n1_p13_Giombini http://hdl.handle.net/20.500.12110/paper_00166707_v136_n1_p13_Giombini
work_keys_str_mv	AT giombinimarianoignacio nucleotidepolymorphisminthedroughtresponsivegeneasr2inwildpopulationsoftomato AT frankelnicolas nucleotidepolymorphisminthedroughtresponsivegeneasr2inwildpopulationsoftomato AT iusemnorbertodaniel nucleotidepolymorphisminthedroughtresponsivegeneasr2inwildpopulationsoftomato AT hassonestebanruben nucleotidepolymorphisminthedroughtresponsivegeneasr2inwildpopulationsoftomato
_version_	1768545402731102208

Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato

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