Mining gene regulatory networks by neural modeling of expression timeseries

Several machine learning techniques have been developed for discovering interesting and unknown relations between variables from data, even more when these techniques can assist in understanding the behaviour of a complex system. This behaviour can be represented by the interactions between its vari...

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Autores principales: Rubiolo, Mariano, Milone, Diego H., Stegmayer, Georgina
Formato: Objeto de conferencia
Lenguaje:Inglés
Publicado: 2016
Materias:
Acceso en línea:http://sedici.unlp.edu.ar/handle/10915/57023
http://45jaiio.sadio.org.ar/sites/default/files/ASAI-18_0.pdf
Aporte de:
id I19-R120-10915-57023
record_format dspace
institution Universidad Nacional de La Plata
institution_str I-19
repository_str R-120
collection SEDICI (UNLP)
language Inglés
topic Ciencias Informáticas
gene regulatory network (GRN)
Patterns (e.g., client/server, pipeline, blackboard)
spellingShingle Ciencias Informáticas
gene regulatory network (GRN)
Patterns (e.g., client/server, pipeline, blackboard)
Rubiolo, Mariano
Milone, Diego H.
Stegmayer, Georgina
Mining gene regulatory networks by neural modeling of expression timeseries
topic_facet Ciencias Informáticas
gene regulatory network (GRN)
Patterns (e.g., client/server, pipeline, blackboard)
description Several machine learning techniques have been developed for discovering interesting and unknown relations between variables from data, even more when these techniques can assist in understanding the behaviour of a complex system. This behaviour can be represented by the interactions between its variables, for instance as a directed graph. A gene regulatory network (GRN) is an abstract mapping of gene regulations in living organisms that can help to predict the system behavior. During last years, many approaches have been proposed to unravel the complexity of gene regulation. Genes interact with one another and these interactions can be measured over a number of time steps, producing temporal gene expression profiles. A hot topic on gene expression data analysis nowadays is the reconstruction of a GRN from such data, revealing the underlying network of genetogene interactions. In other words, the goal is to determine the pattern of activations and inhibitions among genes that make up the underlying GRN.
format Objeto de conferencia
Objeto de conferencia
author Rubiolo, Mariano
Milone, Diego H.
Stegmayer, Georgina
author_facet Rubiolo, Mariano
Milone, Diego H.
Stegmayer, Georgina
author_sort Rubiolo, Mariano
title Mining gene regulatory networks by neural modeling of expression timeseries
title_short Mining gene regulatory networks by neural modeling of expression timeseries
title_full Mining gene regulatory networks by neural modeling of expression timeseries
title_fullStr Mining gene regulatory networks by neural modeling of expression timeseries
title_full_unstemmed Mining gene regulatory networks by neural modeling of expression timeseries
title_sort mining gene regulatory networks by neural modeling of expression timeseries
publishDate 2016
url http://sedici.unlp.edu.ar/handle/10915/57023
http://45jaiio.sadio.org.ar/sites/default/files/ASAI-18_0.pdf
work_keys_str_mv AT rubiolomariano mininggeneregulatorynetworksbyneuralmodelingofexpressiontimeseries
AT milonediegoh mininggeneregulatorynetworksbyneuralmodelingofexpressiontimeseries
AT stegmayergeorgina mininggeneregulatorynetworksbyneuralmodelingofexpressiontimeseries
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