A GHEP-ISFG collaborative study on the genetic variation of 38 autosomal indels for human identification in different continental populations

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A collaborative effort was carried out by the Spanish and Portuguese Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) to promote knowledge exchange between associate laboratories interested in the implementation of indel-based methodologies and build allele frequ...

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Autores principales: Pereira, R., Alves, C., Aler, M., Amorim, A., Arévalo, C., Betancor, E., Braganholi, D., Bravo, M. L., Brito, P., Builes, J. J., Burgos, G., Carvalho, E. F., Castillo, A., Catanesi, Cecilia Inés, Cicarelli, R. M. B., Coufalova, P., Dario, P., D’Amato, M. E., Davison, S., Ferragut, J., Fondevila, M., Furfurov, S., García, O., Gaviria, A., Gomes, I., González, E., Gonzalez-Liñan, A., Gross, T. E., Hernández, A., Huang, Q., Jiménez, S., Jobim, L. F., López-Parra, A. M., Marino, M., Marques, S., Martínez-Cortés, G., Masciovecchio, V., Parra, D., Penacino, G., Pinheiro, M. F., Porto, M. J., Posada, Y., Restrepo, C., Ribeiro, T., Rubio, L., Sala, A., Santurtún, A., Solís, L. S., Souto, L., Streitemberger, E., Torres, A., Vilela-Lamego, C., Yunis, J. J., Yurrebaso, I., Gusmão, L.
Formato: Articulo
Lenguaje:Inglés
Publicado: 2018
Materias:
Ciencias Exactas
Medicina
Forensic genetics
Human identification
Insertion deletion (indel)
Allele frequency databases
Population data
Acceso en línea:http://sedici.unlp.edu.ar/handle/10915/128519
Aporte de:
SEDICI (UNLP) de Universidad Nacional de La Plata
id I19-R120-10915-128519
record_format dspace
institution Universidad Nacional de La Plata
institution_str I-19
repository_str R-120
collection SEDICI (UNLP)
language Inglés
topic Ciencias Exactas
Medicina
Forensic genetics
Human identification
Insertion deletion (indel)
Allele frequency databases
Population data
spellingShingle Ciencias Exactas
Medicina
Forensic genetics
Human identification
Insertion deletion (indel)
Allele frequency databases
Population data
Pereira, R.
Alves, C.
Aler, M.
Amorim, A.
Arévalo, C.
Betancor, E.
Braganholi, D.
Bravo, M. L.
Brito, P.
Builes, J. J.
Burgos, G.
Carvalho, E. F.
Castillo, A.
Catanesi, Cecilia Inés
Cicarelli, R. M. B.
Coufalova, P.
Dario, P.
D’Amato, M. E.
Davison, S.
Ferragut, J.
Fondevila, M.
Furfurov, S.
García, O.
Gaviria, A.
Gomes, I.
González, E.
Gonzalez-Liñan, A.
Gross, T. E.
Hernández, A.
Huang, Q.
Jiménez, S.
Jobim, L. F.
López-Parra, A. M.
Marino, M.
Marques, S.
Martínez-Cortés, G.
Masciovecchio, V.
Parra, D.
Penacino, G.
Pinheiro, M. F.
Porto, M. J.
Posada, Y.
Restrepo, C.
Ribeiro, T.
Rubio, L.
Sala, A.
Santurtún, A.
Solís, L. S.
Souto, L.
Streitemberger, E.
Torres, A.
Vilela-Lamego, C.
Yunis, J. J.
Yurrebaso, I.
Gusmão, L.
A GHEP-ISFG collaborative study on the genetic variation of 38 autosomal indels for human identification in different continental populations
topic_facet Ciencias Exactas
Medicina
Forensic genetics
Human identification
Insertion deletion (indel)
Allele frequency databases
Population data
description A collaborative effort was carried out by the Spanish and Portuguese Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) to promote knowledge exchange between associate laboratories interested in the implementation of indel-based methodologies and build allele frequency databases of 38 indels for forensic applications. These databases include populations from different countries that are relevant for identification and kinship investigations undertaken by the participating laboratories. Before compiling population data, participants were asked to type the 38 indels in blind samples from annual GHEP-ISFG proficiency tests, using an amplification protocol previously described. Only laboratories that reported correct results contributed with population data to this study. A total of 5839 samples were genotyped from 45 different populations from Africa, America, East Asia, Europe and Middle East. Population differentiation analysis showed significant differences between most populations studied from Africa and America, as well as between two Asian populations from China and East Timor. Low F<sub>ST</sub> values were detected among most European populations. Overall diversities and parameters of forensic efficiency were high in populations from all continents.
format Articulo
Articulo
author Pereira, R.
Alves, C.
Aler, M.
Amorim, A.
Arévalo, C.
Betancor, E.
Braganholi, D.
Bravo, M. L.
Brito, P.
Builes, J. J.
Burgos, G.
Carvalho, E. F.
Castillo, A.
Catanesi, Cecilia Inés
Cicarelli, R. M. B.
Coufalova, P.
Dario, P.
D’Amato, M. E.
Davison, S.
Ferragut, J.
Fondevila, M.
Furfurov, S.
García, O.
Gaviria, A.
Gomes, I.
González, E.
Gonzalez-Liñan, A.
Gross, T. E.
Hernández, A.
Huang, Q.
Jiménez, S.
Jobim, L. F.
López-Parra, A. M.
Marino, M.
Marques, S.
Martínez-Cortés, G.
Masciovecchio, V.
Parra, D.
Penacino, G.
Pinheiro, M. F.
Porto, M. J.
Posada, Y.
Restrepo, C.
Ribeiro, T.
Rubio, L.
Sala, A.
Santurtún, A.
Solís, L. S.
Souto, L.
Streitemberger, E.
Torres, A.
Vilela-Lamego, C.
Yunis, J. J.
Yurrebaso, I.
Gusmão, L.
author_facet Pereira, R.
Alves, C.
Aler, M.
Amorim, A.
Arévalo, C.
Betancor, E.
Braganholi, D.
Bravo, M. L.
Brito, P.
Builes, J. J.
Burgos, G.
Carvalho, E. F.
Castillo, A.
Catanesi, Cecilia Inés
Cicarelli, R. M. B.
Coufalova, P.
Dario, P.
D’Amato, M. E.
Davison, S.
Ferragut, J.
Fondevila, M.
Furfurov, S.
García, O.
Gaviria, A.
Gomes, I.
González, E.
Gonzalez-Liñan, A.
Gross, T. E.
Hernández, A.
Huang, Q.
Jiménez, S.
Jobim, L. F.
López-Parra, A. M.
Marino, M.
Marques, S.
Martínez-Cortés, G.
Masciovecchio, V.
Parra, D.
Penacino, G.
Pinheiro, M. F.
Porto, M. J.
Posada, Y.
Restrepo, C.
Ribeiro, T.
Rubio, L.
Sala, A.
Santurtún, A.
Solís, L. S.
Souto, L.
Streitemberger, E.
Torres, A.
Vilela-Lamego, C.
Yunis, J. J.
Yurrebaso, I.
Gusmão, L.
author_sort Pereira, R.
title A GHEP-ISFG collaborative study on the genetic variation of 38 autosomal indels for human identification in different continental populations
title_short A GHEP-ISFG collaborative study on the genetic variation of 38 autosomal indels for human identification in different continental populations
title_full A GHEP-ISFG collaborative study on the genetic variation of 38 autosomal indels for human identification in different continental populations
title_fullStr A GHEP-ISFG collaborative study on the genetic variation of 38 autosomal indels for human identification in different continental populations
title_full_unstemmed A GHEP-ISFG collaborative study on the genetic variation of 38 autosomal indels for human identification in different continental populations
title_sort ghep-isfg collaborative study on the genetic variation of 38 autosomal indels for human identification in different continental populations
publishDate 2018
url http://sedici.unlp.edu.ar/handle/10915/128519
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bdutipo_str Repositorios
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