Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans

Cercospora kikuchii (Tak. Matsumoto & Tomoy.) M.W. Gardner 1927 is an ascomycete fungal pathogen that causes Cercospora leaf blight and purple seed stain on soybean. Here, we report the first draft genome sequence and assembly of this pathogen. The C. kikuchii strain ARG_18_001 was isolated from...

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Autores principales: Sautua, Francisco José, Gonzalez, Sergio A., Doyle, Vinson P., Berretta, Marcelo F., Gordó, Manuela, Scandiani, María Mercedes, Rivarola, Máximo L., Fernández, Paula, Carmona, Marcelo Aníbal
Formato: publishedVersion
Lenguaje:Inglés
Publicado: Elsevier 2021
Materias:
Cercospora kikuchii
Draft Genome
Next Generation Sequencing (NGS)
Cercospora Leaf Blight
Purple Seed Stain
Agriculture
Acceso en línea:http://hdl.handle.net/2133/20033
http://hdl.handle.net/2133/20033
Aporte de:
Repositorio Hipermedial de la Universidad Nacional de Rosario (UNR) de Universidad Nacional de Rosario
id I15-R121-2133-20033
record_format dspace
institution Universidad Nacional de Rosario
institution_str I-15
repository_str R-121
collection Repositorio Hipermedial de la Universidad Nacional de Rosario (UNR)
language Inglés
orig_language_str_mv eng
topic Cercospora kikuchii
Draft Genome
Next Generation Sequencing (NGS)
Cercospora Leaf Blight
Purple Seed Stain
Agriculture
spellingShingle Cercospora kikuchii
Draft Genome
Next Generation Sequencing (NGS)
Cercospora Leaf Blight
Purple Seed Stain
Agriculture
Sautua, Francisco José
Gonzalez, Sergio A.
Doyle, Vinson P.
Berretta, Marcelo F.
Gordó, Manuela
Scandiani, María Mercedes
Rivarola, Máximo L.
Fernández, Paula
Carmona, Marcelo Aníbal
Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
topic_facet Cercospora kikuchii
Draft Genome
Next Generation Sequencing (NGS)
Cercospora Leaf Blight
Purple Seed Stain
Agriculture
description Cercospora kikuchii (Tak. Matsumoto & Tomoy.) M.W. Gardner 1927 is an ascomycete fungal pathogen that causes Cercospora leaf blight and purple seed stain on soybean. Here, we report the first draft genome sequence and assembly of this pathogen. The C. kikuchii strain ARG_18_001 was isolated from soybean purple seed collected from San Pedro, Buenos Aires, Argentina, during the 2018 harvest. The genome was sequenced using a 2 × 150 bp paired-end method by Illumina NovaSeq 6000. The C. kikuchii protein-coding genes were predicted using FunGAP (Fungal Genome Annotation Pipeline). The draft genome assembly was 33.1 Mb in size with a GC-content of 53%. The gene prediction resulted in 14,856 gene models/14,721 protein coding genes. Genomic data of C. kikuchii presented here will be a useful resource for future studies of this pathosystem. The data can be accessed at GenBank under the accession number VTAY00000000 https://www.ncbi.nlm.nih.gov/nuccore/VTAY00000000.
format publishedVersion
author Sautua, Francisco José
Gonzalez, Sergio A.
Doyle, Vinson P.
Berretta, Marcelo F.
Gordó, Manuela
Scandiani, María Mercedes
Rivarola, Máximo L.
Fernández, Paula
Carmona, Marcelo Aníbal
author_facet Sautua, Francisco José
Gonzalez, Sergio A.
Doyle, Vinson P.
Berretta, Marcelo F.
Gordó, Manuela
Scandiani, María Mercedes
Rivarola, Máximo L.
Fernández, Paula
Carmona, Marcelo Aníbal
author_sort Sautua, Francisco José
title Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_short Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_full Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_fullStr Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_full_unstemmed Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_sort draft genome sequence data of cercospora kikuchii, a causal agent of cercospora leaf blight and purple seed stain of soybeans
publisher Elsevier
publishDate 2021
url http://hdl.handle.net/2133/20033
http://hdl.handle.net/2133/20033
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