Microsatellite typing of ancient maize: Insights into the history of agriculture in southern South America
Archaeological maize specimens from Andean sites of southern South America, dating from 400 to 1400 years before present, were tested for the presence of ancient DNA and three microsatellite loci were typed in the specimens that gave positive results. Genotypes were also obtained for 146 individuals...
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2007
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| 024 | 7 | |2 Molecular Sequence Numbers |a GENBANK: AY965913, AY965914, AY965915, AY965916, AY965917, AY965918, AY965919, AY965920, AY965921, AY965922, AY965923, AY965924, AY965925, AY965926, AY965927, AY965928, AY965929, AY965930, AY965931, AY965932, AY965933, AY965934, AY965935, AY965936, AY965937, AY965938, AY965939, AY965940, AY965941, AY965942, AY965943, AY965944, AY965945, AY965946, AY965947, AY965948, AY965949, AY965950, AY965951, AY965952, AY965953, AY965954, AY965955, AY965956, AY965957, AY965958, AY965959, AY965960, AY965961, AY965962, AY965963, AY965964, AY965965, AY965966, AY965967, AY965968, AY965969, AY965970, AY965971, AY965972, AY965973, AY965974, AY965975, AY965976, AY965977, AY965978, AY965979, AY965980, AY965981, AY965982, AY965983, AY965984, AY965985, AY965986, AY965987, AY965988, AY965989, AY965990, AY965991, AY965992, AY965993, AY965994 | |
| 040 | |a Scopus |b spa |c AR-BaUEN |d AR-BaUEN | ||
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| 100 | 1 | |a Lia, V.V. | |
| 245 | 1 | 0 | |a Microsatellite typing of ancient maize: Insights into the history of agriculture in southern South America |
| 260 | |c 2007 | ||
| 270 | 1 | 0 | |m Brown, T.A.; Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom; email: terry.brown@manchester.ac.uk |
| 506 | |2 openaire |e Política editorial | ||
| 504 | |a Albeck, M.E., La vida agraria de los Andes del Sur (2000) Los pueblos originarios y la conquista, pp. 187-227. , ed. M. N. Tarragó, pp, Buenos Aires, Argentina: Editorial Sudamericana | ||
| 504 | |a Allaby, R.G., O'Donoghue, K., Sallares, R., Jones, M.K., Brown, T.A., Evidence for the survival of ancient DNA in charred wheat seeds from European archaeological sites (1997) Ancient Biomol, 1, pp. 119-129 | ||
| 504 | |a Benz, B.F., Archaeological evidence of teosinte domestication from Guild Naquitz, Oaxaca (2001) Proc. Natl Acad. Sci. USA, 98, pp. 2104-2106. , doi:10.1073/pnas.98.4.2104 | ||
| 504 | |a Benz, B.F., Iltis, H.H., Studies in archaeological maize I: The 'wild' maize from San Marcos cave reexamined (1990) Am. Antiq, 55, pp. 500-511. , doi:10.2307/281280 | ||
| 504 | |a Brown, T.A., Allaby, R.G., Sallares, R., Jones, G., Ancient DNA in charred wheats: Taxonomic identification of mixed and single grains (1998) Ancient Biomol, 2, pp. 185-193 | ||
| 504 | |a Castro, R.V., Tarragó, M.N., Los inicios dela producción de alimentos en el Cono Sur de América (1992) Revista de Arqueología Americana, 6, pp. 91-124 | ||
| 504 | |a Cornuet, J.-M., Piry, S., Luikart, G., Estoup, A., Solignac, M., New methods employing multilocus genotypes to select or exclude populations as origins of individuals (1999) Genetics, 153, pp. 1989-2000 | ||
| 504 | |a Dellaporta, I.K., Wood, J., Hicks, J.B., A plant DNA minipreparation (1983) Plant Mol. Biol. Rep, 1, pp. 19-21. , version II | ||
| 504 | |a Doebley, J.F., Molecular systematics of Zea (Gramineae) (1990) Maydica, 35, pp. 143-150 | ||
| 504 | |a Freitas, F.O., Bendel, G., Allaby, R.G., Brown, T.A., DNA from primitive maize landraces and archaeological remains: Implications for the domestication of maize and its expansion into South America (2003) J. Archaeol. Sci, 30, pp. 901-908. , doi:10.1016/S0305-4403(02)00266-2 | ||
| 504 | |a Goloubinoff, P., Pääbo, S., Wilson, A., Evolution of maize inferred from sequence diversity of an Adh2 gene segment from archaeological specimens (1993) Proc. Natl Acad. Sci. USA, 90, pp. 1997-2001. , doi:10.1073/pnas.90.5.1997 | ||
| 504 | |a Goodman, M.M., Bird, R.M., The races of maize. IV: Tentative grouping of 219 Latin American races (1977) Econ. Bot, 31, pp. 204-221 | ||
| 504 | |a Goodman, M.M., Brown, W.L., Races of corn (1988) Corn and corn improvement, pp. 33-79. , ed. G. F. Sprague & J. W. Dudley, pp, Madison, WI: American Society for Agronomy | ||
| 504 | |a Hadly, E., van Tunen, M., Chan, Y., Heiman, K., Ancient DNA evidence of prolonged population persistence with negligible genetic diversity in an endemic tuco-tuco (Ctenomys sociabilis) (2003) J. Mammal, 84, pp. 403-417. , doi:10. 1644/1545-1542(2003)084〈0403:ADEOPP〉2.0.CO;2 | ||
| 504 | |a Hansen, A.J., Willerslev, E., Wiuf, C., Mourier, T., Arctander, P., Statistical evidence for miscoding lesions in ancient DNA templates (2001) Mol. Biol. Evol, 18, pp. 262-265 | ||
| 504 | |a Higgins, D.G., Thompson, J.D., Gibson, T.J., CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice (1994) Nucleic Acids Res, 22, pp. 4673-4680 | ||
| 504 | |a Hofreiter, M., Jaenicke, V., Serre, D., von Haeseler, A., Pääbo, S., DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA (2001) Nucleic Acids Res, 29, pp. 4793-4799. , doi:10.1093/nar/29.23.4793 | ||
| 504 | |a Höss, M., Jaruga, P., Zastawny, T., Dizdaroglu, M., Pääbo, S., DNA damage and DNA sequence retrieval from ancient tissues (1996) Nucleic Acids Res, 24, pp. 1304-1307. , doi:10.1093/nar/24.7. 1304 | ||
| 504 | |a Hu, W., Das, O.P., Messing, J., Zeon-1, a member of a new maize retrotransposon family (1995) Mol. Gen. Genet, 248, pp. 471-480. , doi:10.1007/BF02191647 | ||
| 504 | |a Jaenicke-Després, V., Buckler, E.S., Smith, B., Gilbert, M.T.P., Cooper, A., Doebley, J., Pääbo, S., Early allelic selection in maize as revealed by ancient DNA (2003) Science, 302, pp. 1206-1208. , doi:10.1126/science.1089056 | ||
| 504 | |a Korstanje, M.A., Wurschmidt, A., Producir y recolectar en los valles altos del NOA: Los Viscos como caso de estudio (1999) En los tres reinos: Prácticas en el Cono Sur de América, pp. 151-160. , ed. C. A. Aschero, M. Korstanje & P. Vuoto, pp, Buenos Aires, Argentina: Ediciones Magna Publicaciones | ||
| 504 | |a Lia, V. V. 2004 Diversidad genética y estructura poblacional en razas nativas de maíz (Zea mays ssp. mays) del Noroeste Argentino: presente y pasado del germoplasma autóctono. Ph.D. thesis, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, ArgentinaManen, J.F., Bouby, L., Dalnoki, O., Marinval, P., Turgay, M., Schlumbaum, A., Microsatellites from archaeological Vitis vinifera seeds allow a tentative assignment of the geographical origin of ancient cultivars (2003) J. Archaeol. Sci, 30, pp. 721-729. , doi:10.1016/S0305- 4403(02)00244-3 | ||
| 504 | |a Matsuoka, Y., Mitchell, S.E., Kresovich, S., Goodman, M.M., Doebley, J.F., Microsatellites in Zea - variability, patterns of mutations, and use for evolutionary studies (2002) Theor. Appl. Genet, 104, pp. 436-450. , doi:10.1007/s001220100694 | ||
| 504 | |a Matsuoka, Y., Vigouroux, Y., Goodman, M.M., Sanchez, J., Buckler, G.E., Doebley, J., A single domestication for maize shown by multilocus microsatellite genotyping (2002) Proc. Natl Acad. Sci. USA, 99, pp. 6080-6084. , doi:10.1073/pnas.052125199 | ||
| 504 | |a McClintock, B., Kato, T.A., Blumenschein, A., (1981) Chromosome constitution of the races of maize. Its significance in the interpretation of relationships between races and varieties in the Americas, , Chapingo, Mexico: Colegio de Postgraduados | ||
| 504 | |a Meyers, B.C., Tingey, S.V., Morgante, M., Abundance, distribution and transcriptional activity of repetitive elements in the maize genome (2001) Genome Res, 11, pp. 1660-1676. , doi:10.1101/gr.188201 | ||
| 504 | |a O'Donoghue, K., Clapham, A., Evershed, R., Brown, T.A., Remarkable preservation of biomolecules in ancient radish seeds (1996) Proc. R. Soc. B, 263, pp. 541-547 | ||
| 504 | |a Orlando, L., Leonard, J.A., Thenot, A., Laudet, V., Guerin, C., Hänni, C., Ancient DNA analysis reveals woolly rhino evolutionary relationships (2003) Mol. Phylogenet. Evol, 28, pp. 485-499. , doi:10.1016/S1055-7903(03)00023-X | ||
| 504 | |a Pääbo, S., Ancient DNA: Extraction, characterization, molecular cloning, and enzymatic amplificaton (1989) Proc. Natl Acad. Sci. USA, 86, pp. 1939-1943. , doi:10.1073/pnas.86.6.1939 | ||
| 504 | |a Paetkau, D., Calvert, W., Stirling, I., Strobeck, C., Microsatellite analysis of population structure in Canadian polar bears (1995) Mol. Ecol, 4, pp. 347-354 | ||
| 504 | |a Piperno, D.R., Flannery, K.V., The earliest archaeological maize (Zea mays L.) from highland Mexico: New accelerator mass spectrometry dates and their implications (2001) Proc. Natl Acad. Sci. USA, 98, pp. 2101-2103. , doi:10.1073/pnas.98.4.2101 | ||
| 504 | |a Piperno, D.R., Pearsall, D.M., (1998) The origins of agriculture in the lowland Neotropics, , San Diego, CA: Academic Press | ||
| 504 | |a Poggio, L., Rosato, M., Chiavarino, A.M., Naranjo, C.A., Genome size and environmental correlations in maize (Zea mays ssp. mays, Poaceae) (1998) Ann. Bot, 82, pp. 107-115. , doi:10.1006/anbo. 1998.0757 | ||
| 504 | |a Poinar, H.N., The top 10 list: Criteria of authenticity for DNA from ancient and forensic samples (2003) International congress series, p. 1239 | ||
| 504 | |a Previgliano, C.H., Ceruti, C., Reinhard, J., Araoz, F.A., Diez, J.G., Radiologic evaluation of the Llullaillaco mummies (2003) Am. J. Roentgenol, 181, pp. 1473-1479 | ||
| 504 | |a Raymond, M. & Rousset, F. 1995 GENEPOP version 1.2, population genetics software for exact tests and ecumenicism. J. Hered. 86, 248-249Rollo, F., Venanzi, F.M., Amici, A., Nucleic acids in mummified plant seeds: Biochemistry and molecular genetics of pre-Columbian maize (1991) Genet. Res, 58, pp. 193-201 | ||
| 504 | |a Rollo, F., Venanzi, F.M., Amici, A., DNA and RNA from ancient plant seeds (1994) Recovery and analysis of genetic material from paleontological, archaeological, museum, medical, and forensic specimens, pp. 218-236. , ed. B. Herrmann & S. Hummel, pp, New York, NY: Springer | ||
| 504 | |a SanMiguel, P., Nested retrotransposons in the intergenic regions of the maize genome (1996) Science, 274, pp. 765-768. , doi:10.1126/science.274.5288.765 | ||
| 504 | |a Sempé, C., Caracterización de la cultura Saujil. Obra del Centenario del Museo de La Plata (1977) Antropología, 2, pp. 211-235 | ||
| 504 | |a Staller, J.E., Thompson, R.G., A multidisciplinary approach to understanding the initial introduction of maize into coastal Ecuador (2002) J. Archaeol. Sci, 29, pp. 33-50. , doi:10.1006/jasc.2001.0750 | ||
| 504 | |a Tarragó, M.N., El proceso de agriculturización en el Noroeste Argentino, Zona Valliserrana (1980) Actas del V Congreso Nacional de Arqueología Argentina, 1 | ||
| 504 | |a Vásquez, V., Arceo, J.M., Rosales, T., Koschmieder, K., Caballero, J.L., Dorado, G., Archaeological and contemporary native breeds of corn (Zea mays) from North Peru: Phylogeny by microsatellite (STR) fingerprinting Molecular markers, PCR, bioinformatics and ancient DNA-technology and applications, , In press, ed. G. Dorado, New York, NY: Science Publishers | ||
| 504 | |a Vigouroux, Y., Jaqueth, J.S., Matsuoka, Y., Smith, O.S., Beavis, W.D., Smith, J.S.C., Doebley, J., Rate and pattern of mutation at microsatellite loci in maize (2002) Mol. Biol. Evol, 19, pp. 1251-1260 | ||
| 504 | |a Yang, D., Eng, B., Waye, J., Dudar, J. C. & Saunders, S. R. 1998 Improved DNA extraction from ancient bones using silica-based spin columns. Am. J. Phys. Anthropol. 105, 539-543. (doi:10.1002/(SICI)1096- 8644(199804)105:4 〈539::AID-AJPA10〈3.0.CO;2-1)@@@!v7020!http://www.scopus.com/inward/record.url?eid=2-s2.0-34447334594&partnerID=40&md5=237b70c6e8f6c6878d277438c1cb4284 | ||
| 520 | 3 | |a Archaeological maize specimens from Andean sites of southern South America, dating from 400 to 1400 years before present, were tested for the presence of ancient DNA and three microsatellite loci were typed in the specimens that gave positive results. Genotypes were also obtained for 146 individuals corresponding to modern landraces currently cultivated in the same areas and for 21 plants from Argentinian lowland races. Sequence analysis of cloned ancient DNA products revealed a high incidence of substitutions appearing in only one clone, with transitions prevalent. In the archaeological specimens, there was no evidence of polymorphism at any one of the three microsatellite loci: each exhibited a single allelic variant, identical to the most frequent allele found in contemporary populations belonging to races Amarillo Chico, Amarillo Grande, Blanco and Altiplano. Affiliation between ancient specimens and a set of races from the Andean complex was further supported by assignment tests. The striking genetic uniformity displayed by the ancient specimens and their close relationship with the Andean complex suggest that the latter gene pool has predominated in the western regions of southern South America for at least the past 1400 years. The results support hypotheses suggesting that maize cultivation initially spread into South America via a highland route, rather than through the lowlands. © 2006 The Royal Society. |l eng | |
| 593 | |a Consejo Nacional de Investigaciones Científicas Y Técnicas, Avenida Rivadavia 1917, Ciudad de Buenos Aires, Argentina | ||
| 593 | |a Departamento de Ecología, Genética Y Evolución, Facultad de Ciencias Exactas Y Naturales, Universidad de Buenos Aires, C1428EHA Buenos Aires, Argentina | ||
| 593 | |a Museo Etnográfico J.B. Ambrosetti, Facultad de Filosofía Y Letras, Universidad de Buenos Aires, Avenida Alicia M de Justo 1500, Buenos Aires 1107, Argentina | ||
| 593 | |a Laboratorio de Recursos Genéticos Vegetales 'N.I. Vavilov', Facultad de Agronomía, Universidad de Buenos Aires, Avenida San Martìn 4453, C1417DSE Buenos Aires, Argentina | ||
| 593 | |a Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom | ||
| 690 | 1 | 0 | |a ANCIENT DNA |
| 690 | 1 | 0 | |a LANDRACES |
| 690 | 1 | 0 | |a MAIZE |
| 690 | 1 | 0 | |a MICROSATELLITES |
| 690 | 1 | 0 | |a MICROSATELLITE DNA |
| 690 | 1 | 0 | |a AGRICULTURAL HISTORY |
| 690 | 1 | 0 | |a ARCHAEOLOGICAL EVIDENCE |
| 690 | 1 | 0 | |a CULTIVATION |
| 690 | 1 | 0 | |a DNA |
| 690 | 1 | 0 | |a GENETIC ANALYSIS |
| 690 | 1 | 0 | |a GENETIC MARKER |
| 690 | 1 | 0 | |a GENOTYPE |
| 690 | 1 | 0 | |a MAIZE |
| 690 | 1 | 0 | |a AGRICULTURE |
| 690 | 1 | 0 | |a ALLELISM |
| 690 | 1 | 0 | |a ARTICLE |
| 690 | 1 | 0 | |a DNA FINGERPRINTING |
| 690 | 1 | 0 | |a DNA SEQUENCE |
| 690 | 1 | 0 | |a GENE LOCUS |
| 690 | 1 | 0 | |a GENE POOL |
| 690 | 1 | 0 | |a GENETIC VARIABILITY |
| 690 | 1 | 0 | |a GENOTYPE |
| 690 | 1 | 0 | |a HISTORY |
| 690 | 1 | 0 | |a LANDRACE |
| 690 | 1 | 0 | |a MAIZE |
| 690 | 1 | 0 | |a MOLECULAR CLONING |
| 690 | 1 | 0 | |a NONHUMAN |
| 690 | 1 | 0 | |a NUCLEOTIDE SEQUENCE |
| 690 | 1 | 0 | |a PRIORITY JOURNAL |
| 690 | 1 | 0 | |a SEQUENCE ANALYSIS |
| 690 | 1 | 0 | |a TILLAGE |
| 690 | 1 | 0 | |a ANDES |
| 690 | 1 | 0 | |a ZEA MAYS |
| 651 | 4 | |a SOUTH AMERICA | |
| 651 | 4 | |a ARGENTINA | |
| 651 | 4 | |a SOUTH AMERICA | |
| 651 | 4 | |a SOUTH AMERICA | |
| 700 | 1 | |a Confalonieri, V.A. | |
| 700 | 1 | |a Ratto, N. | |
| 700 | 1 | |a Cámara Hernández, J.A. | |
| 700 | 1 | |a Miante Alzogaray, A.M. | |
| 700 | 1 | |a Poggio, L. | |
| 700 | 1 | |a Brown, T.A. | |
| 773 | 0 | |d 2007 |g v. 274 |h pp. 545-554 |k n. 1609 |p Proc. R. Soc. B Biol. Sci. |x 09628452 |t Proceedings of the Royal Society B: Biological Sciences | |
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| 856 | 4 | 0 | |u https://doi.org/10.1098/rspb.2006.3747 |y DOI |
| 856 | 4 | 0 | |u https://hdl.handle.net/20.500.12110/paper_09628452_v274_n1609_p545_Lia |y Handle |
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