Trapping and characterization of a reaction intermediate in carbapenem hydrolysis by B. cereus metallo-β-lactamase
Metallo-β-lactamases hydrolyze most β-lactam antibiotics. The lack of a successful inhibitor for them is related to the previous failure to characterize a reaction intermediate with a clinically useful substrate. Stopped-flow experiments together with rapid freeze-quench EPR and Raman spectroscopies...
Guardado en:
| Autor principal: | |
|---|---|
| Otros Autores: | , , , , , , , , |
| Formato: | Capítulo de libro |
| Lenguaje: | Inglés |
| Publicado: |
2008
|
| Acceso en línea: | Registro en Scopus DOI Handle Registro en la Biblioteca Digital |
| Aporte de: | Registro referencial: Solicitar el recurso aquí |
| LEADER | 12259caa a22016337a 4500 | ||
|---|---|---|---|
| 001 | PAPER-5592 | ||
| 003 | AR-BaUEN | ||
| 005 | 20230518203514.0 | ||
| 008 | 190411s2008 xx ||||fo|||| 00| 0 eng|d | ||
| 024 | 7 | |2 scopus |a 2-s2.0-56749177280 | |
| 024 | 7 | |2 cas |a carbapenem, 83200-96-8; imipenem, 64221-86-9; beta-Lactamases, EC 3.5.2.6; Carbapenems; Cobalt, 7440-48-4 | |
| 040 | |a Scopus |b spa |c AR-BaUEN |d AR-BaUEN | ||
| 030 | |a JACSA | ||
| 100 | 1 | |a Tioni, M.F. | |
| 245 | 1 | 0 | |a Trapping and characterization of a reaction intermediate in carbapenem hydrolysis by B. cereus metallo-β-lactamase |
| 260 | |c 2008 | ||
| 270 | 1 | 0 | |m Vila, A. J.; Instituto de Biología Molecular Y Celular de Rosario (IBR), Biophysics Section, Universidad Nacional de Rosario, S2002LRK Rosario, Argentina; email: vila@ibrgov.ar |
| 506 | |2 openaire |e Política editorial | ||
| 504 | |a Fisher, J.F., Meroueh, S.O., Mobashery, S., (2005) Chem. Rev, 105, pp. 395-424 | ||
| 504 | |a Frere, J.M., (1995) Mol. Microbiol, 16, pp. 385-395 | ||
| 504 | |a Perez, F., Endimiani, A., Hujer, K.M., Bonomo, R.A., (2007) Curr. Opin. Pharmacol, 7, pp. 459-469 | ||
| 504 | |a Crowder, M.W., Spencer, J., Vila, A.J., (2006) Acc. Chem. Res, 39, pp. 721-728 | ||
| 504 | |a Walsh, T.R., Toleman, M.A., Poirel, L., Nordmann, P., (2005) Clin. Microbiol. Rev, 18, pp. 306-325 | ||
| 504 | |a Bebrone, C., (2007) Biochem. Pharmacol, 74, pp. 1686-1701 | ||
| 504 | |a Hall, B.G., Salipante, S.J., Barlow, M., (2003) J. Mol. Evol, 57, pp. 249-254 | ||
| 504 | |a Galleni, M., Lamotte-Brasseur, J., Rossolint, G.M., Spencer, J., Dideberg, O., Frere, J.M., (2001) Antimicrob. Agents Chemother, 45 (3), pp. 660-663 | ||
| 504 | |a Hernández Valladares, M., Felici, A., Weber, G., Adolph, H.W., Zeppezauer, M., Rossolini, G.M., Amicosante, G., Galleni, M., (1997) Biochemistry, 36, pp. 11534-11541 | ||
| 504 | |a Sharma, N.P., Hajdin, C., Chandrasekar, S., Bennett, B., Yang, K.W., Crowder, M.W., (2006) Biochemistry, 45, pp. 10729-10738 | ||
| 504 | |a Costello, A.L., Sharma, N.P., Yang, K.W., Crowder, M.W., Tierney, D.L., (2006) Biochemistry, 45, pp. 13650-13658 | ||
| 504 | |a Crawford, P.A., Yang, K.W., Sharma, N., Bennett, B., Crowder, M.W., (2005) Biochemistry, 44, pp. 5168-5176 | ||
| 504 | |a Garau, G., Bebrone, C., Anne, C., Galleni, M., Frere, J.M., Dideberg, O., (2005) J. Mol. Biol, 345, pp. 785-795 | ||
| 504 | |a Felici, A., Amicosante, G., Oratore, A., Strom, R., Ledent, P., Joris, B., Fanuel, L., Frere, J.M., (1993) Biochem. J, 291, pp. 151-155 | ||
| 504 | |a Paul-Soto, R., Bauer, R., Frere, J.M., Galleni, M., Meyer-Klaucke, W., Nolting, H., Rossolini, G.M., Adolph, H.W., (1999) J. Biol. Chem, 274, pp. 13242-13249 | ||
| 504 | |a Paul-Soto, R., Hernandez Valladares, M., Galleni, M., Bauer, R., Zeppezauer, M., Frere, J.M., Adolph, H.W., (1998) FEBS Lett, 438, pp. 137-140 | ||
| 504 | |a Wommer, S., Rival, S., Heinz, U., Galleni, M., Frere, J.M., Franceschini, N., Amicosante, G., Adolph, H.W., (2002) J. Biol. Chem, 277, pp. 24142-24147 | ||
| 504 | |a Orellano, E.G., Girardini, J.E., Cricco, J.A., Ceccarelli, E.A., Vila, A.J., (1998) Biochemistry, 37, pp. 10173-10180 | ||
| 504 | |a Wang, Z., Fast, W., Benkovic, S.J., (1999) Biochemistry, 38, pp. 10013-10023 | ||
| 504 | |a Wang, Z., Fast, W., Benkovic, S.J., (1998) J. Am. Chem. Soc, 120, pp. 10788-10789 | ||
| 504 | |a Spencer, J., Clarke, A.R., Walsh, T.R., (2001) J. Biol. Chem, 276, pp. 33638-33644 | ||
| 504 | |a Ullah, J.H., Walsh, T.R., Taylor, I.A., Emery, D.C., Verma, C.S., Gamblin, S.J., Spencer, J., (1998) J. Mol. Biol, 284, pp. 125-136 | ||
| 504 | |a McManus-Muñoz, S., Crowder, M.W., (1999) Biochemistry, 38, pp. 1547-1553 | ||
| 504 | |a Mercuri, P.S., Garcia-Saez, I., De Vriendt, K., Thamm, I., Devreese, B., van Beeumen, J., Dideberg, O., Galleni, M., (2004) J. Biol. Chem, 279, pp. 33630-33638 | ||
| 504 | |a Garrity, J.D., Bennett, B., Crowder, M.W., (2005) Biochemistry, 44, pp. 1078-1087 | ||
| 504 | |a Moran-Barrio, J., Gonzalez, J.M., Lisa, M.N., Costello, A.L., Peraro, M.D., Carloni, P., Bennett, B., Vila, A.J., (2007) J. Biol. Chem, 282, pp. 18286-18293 | ||
| 504 | |a Nukaga, M., Abe, T., Venkatesan, A.M., Mansour, T.S., Bonomo, R.A., Knox, J.R., (2003) Biochemistry, 42, pp. 13152-13159 | ||
| 504 | |a Beadle, B.M., Shoichet, B.K., (2002) Antimicrob. Agents Chemother, 46, pp. 3978-3980 | ||
| 504 | |a Bertini, I., Luchinat, C., (1985) Adv. Inorg. Biochem, 6, pp. 71-111 | ||
| 504 | |a Periyannan, G.R., Costello, A.L., Tierney, D.L., Yang, K.W., Bennett, B., Crowder, M.W., (2006) Biochemistry, 45, pp. 1313-1320 | ||
| 504 | |a Breece, R.M., Costello, A., Bennett, B., Sigdel, T.K., Matthews, M.L., Tierney, D.L., Crowder, M.W., (2005) J. Biol. Chem, 280, pp. 11074-11081 | ||
| 504 | |a Llarrull, L.I., Tioni, M.F., Kowalski, J., Bennett, B., Vila, A.J., (2007) J. Biol. Chem, 282, pp. 30586-30595 | ||
| 504 | |a Hunt, J.B., Neece, S.H., Ginsburg, A., (1985) Anal. Biochem, 146, pp. 150-157 | ||
| 504 | |a Kuzmic, P., (1996) Anal. Biochem, 237, pp. 260-273 | ||
| 504 | |a de Seny, D., Heinz, U., Wommer, S., Kiefer, M., Meyer-Klaucke, W., Galleni, M., Frere, J.M., Adolph, H.W., (2001) J. Biol. Chem, 276, pp. 45065-45078 | ||
| 504 | |a Frisch, M.J., (2004) Gaussian 03, , Gaussian, Inc, Wallingford, CT | ||
| 504 | |a Bicknell, R., Schaeffer, A., Waley, S.G., Auld, D.S., (1986) Biochemistry, 25, pp. 7208-7215 | ||
| 504 | |a Totir, M.A., Helfand, M.S., Carey, M.P., Sheri, A., Buynak, J.D., Bonomo, R.A., Carey, P.R., (2007) Biochemistry, 46, pp. 8980-8987 | ||
| 504 | |a Ratcliffe, R.W., Wildonger, K.J., Dimichele, L., Douglas, A.W., Hajdu, R., Goegelman, R.T., Springer, J.P., Hirshfield, J., (1989) J. Org. Chem, 54, pp. 653-660 | ||
| 504 | |a Zafaralla, G., Mobashery, S., (1992) J. Am. Chem. Soc, 114, pp. 1505-1506 | ||
| 504 | |a Taibi, P., Mobashery, S., (1995) J. Am. Chem. Soc, 117, pp. 7600-7605 | ||
| 504 | |a Levine, I.N., (1999) Quantum Chemistry, , 5th ed, Prentice Hall: New York | ||
| 504 | |a Sulton, D., Pagan-Rodriguez, D., Zhou, X., Liu, Y., Hujer, A.M., Bethel, C.R., Helfand, M.S., Bonomo, R.A., (2005) J. Biol. Chem, 280, pp. 35528-35536 | ||
| 504 | |a Bush, K., (1988) Clin. Microb. Rev, 1, pp. 109-123 | ||
| 504 | |a Imtiaz, U., Billings, E.M., Knox, J.R., Mobashery, S., (1994) Biochemistry, 33, pp. 5728-5738 | ||
| 504 | |a Bounaga, S., Laws, A.P., Galleni, M., Page, M.I., (1998) Biochem. J, 31, pp. 703-711 | ||
| 504 | |a McManus-Munoz, S., Crowder, M.W., (1999) Biochemistry, 38, pp. 1547-1553 | ||
| 504 | |a Spencer, J., Clarke, A.R., Walsh, T.R., (2001) J. Biol. Chem, 276, pp. 33638-33644 | ||
| 504 | |a Xu, D., Xie, D., Guo, H., (2006) J. Biol. Chem, 281, pp. 8740-8747 | ||
| 504 | |a Kumar, A., Periyannan, G.R., Narayanan, B., Kittell, A.W., Kim, J.J., Bennett, B., (2007) Biochem. J, 403, pp. 527-536 | ||
| 504 | |a Gonzalez, J.M., Medrano Martin, F.J., Costello, A.L., Tierney, D.L., Vila, A.J., (2007) J. Mol. Biol, 373, pp. 1141-1156 | ||
| 504 | |a Llarrull, L.I., Fabiane, S.M., Kowalski, J.M., Bennett, B., Sutton, B.J., Vila, A.J., (2007) J. Biol. Chem, 282, pp. 18276-18285 | ||
| 504 | |a Crisp, J., Conners, R., Garrity, J.D., Carenbauer, A.L., Crowder, M.W., Spencer, J., (2007) Biochemistry, 46, pp. 10664-10674 | ||
| 504 | |a Dal Peraro, M., Vila, A.J., Carloni, P., Klein, M.L., (2007) J. Am. Chem. Soc, 129, pp. 2808-2816 | ||
| 504 | |a Llarrull, L.I., Tioni, M.F., Vila, A.J., (2008) J. Am, 130, pp. 15842-15851. , Chem. Soc, preceeding paper in this issue | ||
| 520 | 3 | |a Metallo-β-lactamases hydrolyze most β-lactam antibiotics. The lack of a successful inhibitor for them is related to the previous failure to characterize a reaction intermediate with a clinically useful substrate. Stopped-flow experiments together with rapid freeze-quench EPR and Raman spectroscopies were used to characterize the reaction of Co(II)-BcII with imipenem. These studies show that Co(II)-BcII is able to hydrolyze imipenem in both the mono- and dinuclear forms. In contrast to the situation met for penicillin, the species that accumulates during turnover is an enzyme-intermediate adduct in which the β-lactam bond has already been cleaved. This intermediate is a metal-bound anionic species with a novel resonant structure that is stabilized by the metal ion at the DCH or Zn2 site. This species has been characterized based on its spectroscopic features. This represents a novel, previously unforeseen intermediate that is related to the chemical nature of carbapenems, as confirmed by the finding of a similar intermediate for meropenem. Since carbapenems are the only substrates cleaved by B1, B2, and B3 lactamases, identification of this intermediate could be exploited as a first step toward the design of transition-state-based inhibitors for all three classes of metallo-β-lactamases. © 2008 American Chemical Society. |l eng | |
| 593 | |a Instituto de Biología Molecular Y Celular de Rosario (IBR), Biophysics Section, Universidad Nacional de Rosario, S2002LRK Rosario, Argentina | ||
| 593 | |a Instituto de Química Rosario (IQUIR), Consejo Nacional de Investigaciones Científicas Y Técnicas de Argentina (CONICET), Universidad Nacional de Rosario, Suipacha 531, S2002LRK Rosario, Argentina | ||
| 593 | |a Departamento de Química Inorgánica, Analítica Y Química Fisica, INQUIMAE-CONICET, Pab. 2, C1428EHA Buenos Aires, Argentina | ||
| 593 | |a Institut für Chemie, Technische Universität Berlin, Strasse des 17, Juni 135, Sekr. PC14, D10623-Berlin, Germany | ||
| 593 | |a National Biomedical EPR Center, Department of Biophysics, Medical College of Wisconsin, Milwaukee, WI 53226-0509, United States | ||
| 593 | |a Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, United States | ||
| 593 | |a Department of Chemistry, Eastern Illinois University, Charleston, IL 61920, United States | ||
| 690 | 1 | 0 | |a METAL IONS |
| 690 | 1 | 0 | |a SUBSTRATES |
| 690 | 1 | 0 | |a ANIONIC SPECIES |
| 690 | 1 | 0 | |a CARBAPENEMS |
| 690 | 1 | 0 | |a CHEMICAL NATURES |
| 690 | 1 | 0 | |a DINUCLEAR |
| 690 | 1 | 0 | |a LACTAMASE |
| 690 | 1 | 0 | |a LACTAMASES |
| 690 | 1 | 0 | |a MEROPENEM |
| 690 | 1 | 0 | |a RAPID FREEZES |
| 690 | 1 | 0 | |a REACTION INTERMEDIATES |
| 690 | 1 | 0 | |a RESONANT STRUCTURES |
| 690 | 1 | 0 | |a SPECTROSCOPIC FEATURES |
| 690 | 1 | 0 | |a ELECTRON SPIN RESONANCE SPECTROSCOPY |
| 690 | 1 | 0 | |a CARBAPENEM |
| 690 | 1 | 0 | |a CUPRIC ION |
| 690 | 1 | 0 | |a IMIPENEM |
| 690 | 1 | 0 | |a METAL ION |
| 690 | 1 | 0 | |a METALLO BETA LACTAMASE |
| 690 | 1 | 0 | |a PENICILLIN DERIVATIVE |
| 690 | 1 | 0 | |a ARTICLE |
| 690 | 1 | 0 | |a BACILLUS CEREUS |
| 690 | 1 | 0 | |a CHEMICAL REACTION |
| 690 | 1 | 0 | |a DRUG DESIGN |
| 690 | 1 | 0 | |a FREEZING |
| 690 | 1 | 0 | |a HYDROLYSIS |
| 690 | 1 | 0 | |a NONHUMAN |
| 690 | 1 | 0 | |a RAMAN SPECTROMETRY |
| 690 | 1 | 0 | |a TURNOVER TIME |
| 690 | 1 | 0 | |a BACILLUS CEREUS |
| 690 | 1 | 0 | |a BETA-LACTAMASES |
| 690 | 1 | 0 | |a CARBAPENEMS |
| 690 | 1 | 0 | |a COBALT |
| 690 | 1 | 0 | |a ELECTRON SPIN RESONANCE SPECTROSCOPY |
| 690 | 1 | 0 | |a HYDROLYSIS |
| 690 | 1 | 0 | |a KINETICS |
| 690 | 1 | 0 | |a MODELS, BIOLOGICAL |
| 690 | 1 | 0 | |a PROTEIN STRUCTURE, TERTIARY |
| 690 | 1 | 0 | |a SPECTRUM ANALYSIS, RAMAN |
| 690 | 1 | 0 | |a STEREOISOMERISM |
| 700 | 1 | |a Llarrull, L.I. | |
| 700 | 1 | |a Poeylaut-Palena, A.A. | |
| 700 | 1 | |a Martí, M.A. | |
| 700 | 1 | |a Saggu, M. | |
| 700 | 1 | |a Periyannan, G.R. | |
| 700 | 1 | |a Mata, E.G. | |
| 700 | 1 | |a Bennett, B. | |
| 700 | 1 | |a Murgida, D.H. | |
| 700 | 1 | |a Vila, A.J. | |
| 773 | 0 | |d 2008 |g v. 130 |h pp. 15852-15863 |k n. 47 |p J. Am. Chem. Soc. |x 00027863 |w (AR-BaUEN)CENRE-19 |t Journal of the American Chemical Society | |
| 856 | 4 | 1 | |u https://www.scopus.com/inward/record.uri?eid=2-s2.0-56749177280&doi=10.1021%2fja801169j&partnerID=40&md5=520c8bb4cac25675ed7a65cc7e9f6b21 |y Registro en Scopus |
| 856 | 4 | 0 | |u https://doi.org/10.1021/ja801169j |y DOI |
| 856 | 4 | 0 | |u https://hdl.handle.net/20.500.12110/paper_00027863_v130_n47_p15852_Tioni |y Handle |
| 856 | 4 | 0 | |u https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_00027863_v130_n47_p15852_Tioni |y Registro en la Biblioteca Digital |
| 961 | |a paper_00027863_v130_n47_p15852_Tioni |b paper |c PE | ||
| 962 | |a info:eu-repo/semantics/article |a info:ar-repo/semantics/artículo |b info:eu-repo/semantics/publishedVersion | ||
| 963 | |a VARI | ||
| 999 | |c 66545 | ||