Sequence and phylogenetic analysis of genome segments S1, S2, S3 and S6 of Mal de Río Cuarto virus, a newly accepted Fijivirus species
Mal de Río Cuarto virus (MRCV) is a newly described species of the genus Fijivirus, family Reoviridae. The nucleotide sequence of four MRCV genome segments was determined. MRCV S1, S2, S3 and S6 were predicted to encode proteins of 168.4, 134.4, 141.7 and 90 kDa, respectively. MRCV S1 encodes a basi...
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2003
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| LEADER | 16046caa a22016337a 4500 | ||
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| 001 | PAPER-5045 | ||
| 003 | AR-BaUEN | ||
| 005 | 20230518203440.0 | ||
| 008 | 140217s2003 xx ||||fo|||| 00| 0 eng|d | ||
| 024 | 7 | |2 scopus |a 2-s2.0-0345073729 | |
| 024 | 7 | |2 pubmed |a 12606083 | |
| 024 | 7 | |2 Molecular Sequence Numbers |a GENBANK: AF049704, AF049705, AF356083, AF359556, AF499925, AF499926, AF499927, AF499928, AY029520, AY029521; AF133428, AF282467, AF323782, AF389452, AF395872, AF395873, AF418295, AJ294757, D49693, L20508, M24734, M74216, P22679, P35942, U73201, U94887; | |
| 024 | 7 | |2 cas |a RNA directed RNA polymerase, 9026-28-2; DNA, Viral; Viral Proteins | |
| 040 | |a Scopus |b spa |c AR-BaUEN |d AR-BaUEN | ||
| 030 | |a VIRED | ||
| 100 | 1 | |a Distéfano, A.J. | |
| 245 | 1 | 0 | |a Sequence and phylogenetic analysis of genome segments S1, S2, S3 and S6 of Mal de Río Cuarto virus, a newly accepted Fijivirus species |
| 260 | |c 2003 | ||
| 270 | 1 | 0 | |m Del Vas, M.; Instituto de Biotecnología, CICVyA, CNIA, Castelar, Buenos Aires 25 B1712WAA, Argentina; email: mdelvas@cnia.inta.gov.ar |
| 506 | |2 openaire |e Política editorial | ||
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| 520 | 3 | |a Mal de Río Cuarto virus (MRCV) is a newly described species of the genus Fijivirus, family Reoviridae. The nucleotide sequence of four MRCV genome segments was determined. MRCV S1, S2, S3 and S6 were predicted to encode proteins of 168.4, 134.4, 141.7 and 90 kDa, respectively. MRCV S1 encodes a basic protein that contains conserved RNA-dependent RNA polymerase motifs, and is homologous to Rice black streaked dwarf virus (RBSDV), Fiji disease virus (FDV) and Nilaparvata lugens reovirus (NLRV) polymerases as well as to corresponding proteins of members of other genera of the Reoviridae. MRCV S2 codes for a protein with intermediate homology to the ones coded by RBSDV S4 and FDV S3 'B' spike, which is presumably the B-spike protein. MRCV S3 most probably encodes the major core protein and is highly homologous to corresponding proteins of RBSDV S2 and FDV S3. MRCV S6-encoded protein has low homology to the proteins of unknown function coded by RBSDV S6 and FDV S6. The identity levels between all analyzed MRCV coded proteins and their RBSDV counterparts varied between 84.5 and 44.8%. The analysis of the reported sequences allowed a phylogenetic comparison of MRCV with other reovirus and supported its taxonomic status within the genus. © 2002 Elsevier Science B.V. All rights reserved. |l eng | |
| 593 | |a Instituto de Biotecnología, CICVyA, CNIA, Castelar, Buenos Aires 25 B1712WAA, Argentina | ||
| 593 | |a Inst. Fitopatologia y Fisiol. Veg., CICVyA, CNIA, Cordoba, Argentina | ||
| 593 | |a Unidad Integrada CNIA-INTA, Fac. de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina | ||
| 593 | |a Camino 60 cuadras Km 5 1/2, 5119 Cordoba, Argentina | ||
| 690 | 1 | 0 | |a CORE PROTEIN |
| 690 | 1 | 0 | |a FIJIVIRUS |
| 690 | 1 | 0 | |a MRCV |
| 690 | 1 | 0 | |a REOVIRIDAE |
| 690 | 1 | 0 | |a RNA-DEPENDENT RNA POLYMERASE |
| 690 | 1 | 0 | |a CORE PROTEIN |
| 690 | 1 | 0 | |a RNA DIRECTED RNA POLYMERASE |
| 690 | 1 | 0 | |a VIRUS PROTEIN |
| 690 | 1 | 0 | |a AMINO ACID SEQUENCE |
| 690 | 1 | 0 | |a ARTICLE |
| 690 | 1 | 0 | |a CONTROLLED STUDY |
| 690 | 1 | 0 | |a FIGI DISEASE VIRUS |
| 690 | 1 | 0 | |a GENE SEQUENCE |
| 690 | 1 | 0 | |a GENETIC CONSERVATION |
| 690 | 1 | 0 | |a GENOMICS |
| 690 | 1 | 0 | |a MAL DE RIO CUARTO VIRUS |
| 690 | 1 | 0 | |a NILAPARVATA LUGENS REOVIRUS |
| 690 | 1 | 0 | |a NONHUMAN |
| 690 | 1 | 0 | |a NUCLEOTIDE SEQUENCE |
| 690 | 1 | 0 | |a PHYLOGENY |
| 690 | 1 | 0 | |a PRIORITY JOURNAL |
| 690 | 1 | 0 | |a PROTEIN FUNCTION |
| 690 | 1 | 0 | |a PROTEIN MOTIF |
| 690 | 1 | 0 | |a REOVIRUS |
| 690 | 1 | 0 | |a RICE BLACK STREAKED DWARF VIRUS |
| 690 | 1 | 0 | |a RNA VIRUS |
| 690 | 1 | 0 | |a SEQUENCE ANALYSIS |
| 690 | 1 | 0 | |a SEQUENCE HOMOLOGY |
| 690 | 1 | 0 | |a VIRUS GENOME |
| 690 | 1 | 0 | |a VIRUS IDENTIFICATION |
| 690 | 1 | 0 | |a AMINO ACID SEQUENCE |
| 690 | 1 | 0 | |a BASE SEQUENCE |
| 690 | 1 | 0 | |a CLONING, MOLECULAR |
| 690 | 1 | 0 | |a CONSERVED SEQUENCE |
| 690 | 1 | 0 | |a DNA, VIRAL |
| 690 | 1 | 0 | |a GENOME, VIRAL |
| 690 | 1 | 0 | |a MOLECULAR SEQUENCE DATA |
| 690 | 1 | 0 | |a PHYLOGENY |
| 690 | 1 | 0 | |a REOVIRIDAE |
| 690 | 1 | 0 | |a SEQUENCE HOMOLOGY, AMINO ACID |
| 690 | 1 | 0 | |a SPECIES SPECIFICITY |
| 690 | 1 | 0 | |a VIRAL PROTEINS |
| 690 | 1 | 0 | |a FIJI DISEASE VIRUS |
| 690 | 1 | 0 | |a FIJIVIRUS |
| 690 | 1 | 0 | |a MAL DE RIO CUARTO VIRUS |
| 690 | 1 | 0 | |a NILAPARVATA LUGENS |
| 690 | 1 | 0 | |a NILAPARVATA LUGENS REOVIRUS |
| 690 | 1 | 0 | |a REOVIRIDAE |
| 690 | 1 | 0 | |a REOVIRUS SP. |
| 690 | 1 | 0 | |a RICE BLACK STREAKED DWARF VIRUS |
| 650 | 1 | 7 | |2 spines |a VIRUS RNA |
| 700 | 1 | |a Conci, L.R. | |
| 700 | 1 | |a Muñoz Hidalgo, M. | |
| 700 | 1 | |a Guzmán, F.A. | |
| 700 | 1 | |a Hopp, H.E. | |
| 700 | 1 | |a Del Vas, M. | |
| 773 | 0 | |d 2003 |g v. 92 |h pp. 113-121 |k n. 1 |p Virus Res. |x 01681702 |w (AR-BaUEN)CENRE-7132 |t Virus Research | |
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| 856 | 4 | 0 | |u https://hdl.handle.net/20.500.12110/paper_01681702_v92_n1_p113_Distefano |y Handle |
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