Deterministic Limit of Intracellular Calcium Spikes

In nonexcitable cells, global Ca2+ spikes emerge from the collective dynamics of clusters of Ca2+ channels that are coupled by diffusion. Current modeling approaches have opposed stochastic descriptions of these systems to purely deterministic models, while both paradoxically appear compatible with...

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Autor principal: Voorsluijs, V.
Otros Autores: Dawson, S.P, De Decker, Y., Dupont, G.
Formato: Capítulo de libro
Lenguaje:Inglés
Publicado: American Physical Society 2019
Acceso en línea:Registro en Scopus
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100 1 |a Voorsluijs, V. 
245 1 0 |a Deterministic Limit of Intracellular Calcium Spikes 
260 |b American Physical Society  |c 2019 
506 |2 openaire  |e Política editorial 
504 |a Berridge, M.J., Lipp, P., Bootman, M.D., The versatility and universality of calcium signalling (2000) Nat. Rev. Mol. Cell Biol., 1, p. 11 
504 |a Dupont, G., Falcke, M., Kirk, V., Sneyd, J., (2016) Models of Calcium Signalling, 43. , Interdisciplinary Applied Mathematics (Springer International Publishing Switzerland 
504 |a Shuai, J., Rose, H.J., Parker, I., The number and spatial distribution of (Equation presented) receptors underlying calcium puffs in Xenopus oocytes (2006) Biophys. J., 91, p. 4033 
504 |a Wiltgen, S.M., Smith, I.F., Parker, I., Superresolution localization of single functional (Equation presented) channels utilizing (Equation presented) flux as a readout (2010) Biophys. J., 99, p. 437 
504 |a Marchant, J.S., Parker, I., Role of elementary (Equation presented) puffs in generating repetitive (Equation presented) oscillations (2001) EMBO J., 20, p. 65 
504 |a Lock, J.T., Smith, I.F., Parker, I., Comparison of (Equation presented) puffs evoked by extracellular agonists and photoreleased (Equation presented) (2017) Cell Calcium, 63, p. 43 
504 |a Skupin, A., Kettenmann, H., Winkler, U., Wartenberg, M., Sauer, H., Tovey, S.C., Taylor, C.W., Falcke, M., How does intracellular (Equation presented) oscillate: By chance or by the clock? (2008) Biophys. J., 94, p. 2404 
504 |a Thurley, K., Smith, I.F., Tovey, S.C., Taylor, C.W., Parker, I., Falcke, M., Timescales of (Equation presented)-evoked (Equation presented) spikes emerge from (Equation presented) puffs only at the cellular level (2011) Biophys. J., 101, p. 2638 
504 |a Fraiman, D., Pando, B., Dargan, S., Parker, I., Dawson, S.P., Analysis of puff dynamics in oocytes: Interdependence of puff amplitude and interpuff interval (2006) Biophys. J., 90, p. 3897 
504 |a Thul, R., Falcke, M., Stability of Membrane Bound Reactions (2004) Phys. Rev. Lett., 93, p. 188103 
504 |a Thurley, K., Tovey, S.C., Moenke, G., Prince, V.L., Meena, A., Thomas, A.P., Skupin, A., Falcke, M., Reliable encoding of stimulus intensities within random sequences of intracellular (Equation presented) spikes (2014) Sci. Signal. (Online), 7, p. ra59 
504 |a Politi, A., Gaspers, L.D., Thomas, A.P., Höfer, T., Models of (Equation presented) and (Equation presented) oscillations: Frequency encoding and identification of underlying feedbacks (2006) Biophys. J., 90, p. 3120 
504 |a Falcke, M., Moein, M., Tilunaite, A., Thul, R., Skupin, A., On the phase space structure of (Equation presented) induced (Equation presented) signalling and concepts for predictive modeling (2018) Chaos, 28, p. 45115 
504 |a Sneyd, J., Han, J.M., Wang, L., Chen, J., Yang, X., Tanimura, A., Sanderson, M.J., Yule, D.I., On the dynamical structure of calcium oscillations (2017) Proc. Natl. Acad. Sci. U.S.A., 114, p. 1456 
504 |a Skupin, A., Falcke, M., From puffs to global (Equation presented) signals: How molecular properties shape global signals (2009) Chaos, 19, p. 37111 
504 |a Tilunaite, A., Croft, W., Russell, N., Bellamy, T.C., Thul, R., A Bayesian approach to modelling heterogeneous calcium responses in cell populations (2017) PLoS Comput. Biol., 13, p. e1005794 
504 |a Bugrim, A.E., Zhabotinsky, A.M., Epstein, I.R., Calcium waves in a model with a random spatially discrete distribution of (Equation presented) release sites (1997) Biophys. J., 73, p. 2897 
504 |a Jung, P., Swaminathan, D., Ullah, A., Calcium spikes: Chance or necessity? (2010) Chem. Phys., 375, p. 625 
504 |a Swillens, S., Dupont, G., Combettes, L., Champeil, P., From calcium blips to calcium puffs: Theoretical analysis of the requirements for interchannel communication (1999) Proc. Natl. Acad. Sci. U.S.A., 96, p. 13750 
504 |a Bruno, L., Solovey, G., Ventura, A.C., Dargan, S., Dawson, S.P., Quantifying calcium fluxes underlying calcium puffs in Xenopus laevis oocytes (2010) Cell Calcium, 47, p. 273 
504 |a Skupin, A., Kettenmann, H., Falcke, M., Calcium signals driven by single channel noise (2010) PLoS Comput. Biol., 6, p. e1000870 
504 |a Calabrese, A., Fraiman, D., Zysman, D., Ponce Dawson, S., Stochastic fire-diffuse-fire model with realistic cluster dynamics (2010) Phys. Rev. e, 82, p. 31910 
504 |a Bootman, M.D., Berridge, M.J., Lipp, P., Cooking with calcium: The recipes for composing global signals from elementary events (1997) Cell, 91, p. 367 
504 |a Lopez, L.F., Ponce Dawson, S., Luminal (Equation presented) dynamics during (Equation presented) mediated signals (2016) Phys. Biol., 13, p. 36006 
504 |a Gillespie, D.T., Stochastic simulation of chemical kinetics (2007) Annu. Rev. Phys. Chem., 58, p. 35 
504 |a http://link.aps.org/supplemental/10.1103/PhysRevLett.122.088101, See Supplemental Material at for more information on the stochastic algorithm, derivation of the deterministic evolution equations, evolution of the coefficient of variation with respect to (Equation presented) and statistics of (Equation presented) relation for varying (Equation presented); Thomas, D., Lipp, P., Berridge, M.J., Bootman, M.D., Hormone-evoked elementary (Equation presented) signals are not stereotypic, but reflect activation of different size channel clusters and variable recruitment of channels within a cluster (1998) J. Biol. Chem., 273, p. 27130 
504 |a Dupont, G., Abou-Lovergne, A., Combettes, L., Stochastic Aspects of Oscillatory (Equation presented) Dynamics in Hepatocytes (2008) Biophys. J., 95, p. 2193 
504 |a Givré, A., Ponce Dawson, S., Information content in stochastic pulse sequences of intracellular messengers (2018) Front. Phys., 6, p. 74 
520 3 |a In nonexcitable cells, global Ca2+ spikes emerge from the collective dynamics of clusters of Ca2+ channels that are coupled by diffusion. Current modeling approaches have opposed stochastic descriptions of these systems to purely deterministic models, while both paradoxically appear compatible with experimental data. Combining fully stochastic simulations and mean-field analyses, we demonstrate that these two approaches can be reconciled. Our fully stochastic model generates spike sequences that can be seen as noise-perturbed oscillations of deterministic origin, while displaying statistical properties in agreement with experimental data. These underlying deterministic oscillations arise from a phenomenological spike nucleation mechanism. © 2019 American Physical Society.  |l eng 
593 |a Nonlinear Physical Chemistry Unit, Center for Nonlinear Phenomena and Complex Systems (CENOLI), Université Libre de Bruxelles, Boulevard du Triomphe, C.P. 231, Brussels, B-1050, Belgium 
593 |a Departamento de Física, FCEN-UBA and IFIBA, UBA-CONICET, Ciudad Universitaria, Pabellón i, Buenos Aires, 1428, Argentina 
593 |a Unité de Chronobiologie Théorique, Université Libre de Bruxelles, Boulevard du Triomphe, C.P. 231, Brussels, B-1050, Belgium 
700 1 |a Dawson, S.P. 
700 1 |a De Decker, Y. 
700 1 |a Dupont, G. 
773 0 |d American Physical Society, 2019  |g v. 122  |k n. 8  |p Phys Rev Lett  |x 00319007  |w (AR-BaUEN)CENRE-386  |t Physical Review Letters 
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