Characterization of nutrient status of Halamphora luciae (Bacillariophyceae) using matrix-assisted ultraviolet laser-desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS)

The effects of N and P depletion on the production and structural characterization of the cellular carbohydrate polymers of the estuarine diatom Halamphora luciae in batch culture were examined using matrix-assisted laser desorption-ionization time-of flight mass spectrometry (MALDI-TOF MS) compleme...

Descripción completa

Guardado en:
Detalles Bibliográficos
Autor principal: Daglio, Y.
Otros Autores: Salum, M.L, Rodríguez, M.C, Erra-Balsells, R., Matulewicz, M.C
Formato: Capítulo de libro
Lenguaje:Inglés
Publicado: Taylor and Francis Ltd. 2018
Acceso en línea:Registro en Scopus
DOI
Handle
Registro en la Biblioteca Digital
Aporte de:Registro referencial: Solicitar el recurso aquí
LEADER 20138caa a22014657a 4500
001 PAPER-25147
003 AR-BaUEN
005 20230518205709.0
008 190410s2018 xx ||||fo|||| 00| 0 eng|d
024 7 |2 scopus  |a 2-s2.0-85049651213 
040 |a Scopus  |b spa  |c AR-BaUEN  |d AR-BaUEN 
030 |a EJPHE 
100 1 |a Daglio, Y. 
245 1 0 |a Characterization of nutrient status of Halamphora luciae (Bacillariophyceae) using matrix-assisted ultraviolet laser-desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) 
260 |b Taylor and Francis Ltd.  |c 2018 
270 1 0 |m Erra-Balsells, R.; Universidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigación en Hidratos de Carbono (CIHIDECAR), Facultad de Ciencias Exactas y Naturales Pabellón II, 3er P, Ciudad UniversitariaArgentina; email: erra@qo.fcen.uba.ar 
506 |2 openaire  |e Política editorial 
504 |a Abida, H., Dolch, L.J., Meï, C., Villanova, V., Conte, M., Block, M.A., Finazzi, G., Maréchal, E., Membrane glycerolipid remodeling triggered by nitrogen and phosphorus starvation (2015) Phaeodactylum tricornutum. Plant Physiology, 167, pp. 118-136 
504 |a Ai, X.X., Liang, J.R., Gao, Y.H., Lo, S.C.L., Lee, F.W.F., Chen, C.P., Luo, C.S., Du, C., MALDI-TOF MS analysis of the extracellular polysaccharides released by the diatom Thalassiosira pseudonana under various nutrient conditions (2015) Journal of Applied Phycology, 27, pp. 673-684 
504 |a Albersheim, P., Nevins, D.J., English, P.D., Karr, A., A method for the analysis of sugars in plant cell-wall polysaccharides by gas-liquid chromatography (1967) Carbohydrate Research, 5, pp. 340-345 
504 |a Alekseeva, S.A., Shevchenko, N.M., Kusaykin, M.I., Ponomorenko, L.P., Isakov, V.V., Zvyagintseva, T.N., Likhoshvai, E.V., Polysaccharides of diatoms occurring in Lake Baikal (2005) Applied Biochemistry Microbiology, 41, pp. 185-191 
504 |a Alipanah, L., Rohloff, J., Winge, P., Bones, A.M., Brembu, T., (2015) Whole-cell response to nitrogen deprivation in the diatom Phaeodactylum tricornutum. Journal of Experimental Botany, 66, pp. 6281-6296 
504 |a Andrade, L.M., Mendes, M.A., Kowalski, P., Nascimento, C.A.O., Comparative study of different matrix/solvent systems for the analysis of crude lyophilized microalgal preparations using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (2015) Rapid Communications in Mass Spectrometry, 29, pp. 295-303 
504 |a Armbrust, V., (2009) life of diatoms in the world’s oceans. Nature, 459, pp. 185-192. , The 
504 |a Barnech Bielsa, G., Popovich, C., Rodríguez, M.C., Martínez, A.M., Martín, L., Matulewicz, M.C., Leonardi, P., Simultaneous production assessment of triacylglycerols for biodiesel and exopolysaccharides as valuable co-products (2016) Navicula cincta. Algal Research, 15, pp. 120-128 
504 |a Barsanti, L., Passarelli, V., Evangelista, V., Frassanito, A.M., Gualtieri, P., Chemistry, physico-chemistry and applications linked to biological activities of β-glucans (2011) Natural Product Reports, 28, pp. 457-466 
504 |a Beattie, A., Hirst, E.L., Percival, E., Studies on the metabolism of the Chrysophyceae (1961) Biochemical Journal, 79, pp. 531-536 
504 |a Bowler, C., Vardi, A., Allen, A.E., Oceanographic and biogeochemical insights from diatom genomes (2010) Annual Review of Marine Science, 2, pp. 333-365 
504 |a Brembu, T., Mühlroth, A., Alipanah, L., Bones, A.M., The effects of phosphorus limitation on carbon metabolism in diatoms (2017) Philosophical Transactions Royal Society B, 372, p. 20160406 
504 |a Caballero, M.A., Jallet, D., Shi, L., Rithner, C., Zhang, Y., Peers, G., (2016) Quantification of chrysolaminarin from the model diatom Phaeodactylum tricornutum. Algal Research, 20, pp. 180-188 
504 |a Chiovitti, A., Higgins, M.J., Harper, R.E., Wetherbee, R., Bacic, A., The complex polysaccharides of the raphid diatom Pinnularia viridis (Bacillariophyceae) (2003) Journal of Phycology, 39, pp. 543-554 
504 |a Chiovitti, A., Bacic, A., Burke, J., Wetherbee, R., Heterogeneous xylose-rich glycans are associated with extracellular glycoproteins from the biofouling diatom Craspedostauros australis (Bacillariophyceae) (2003) European Journal of Phycology, 38, pp. 351-360 
504 |a Chiovitti, A., Molino, P., Crawford, S.A., Teng, R., Spurck, T., Wetherbee, R., The glucans extracted with warm water from diatoms are mainly derived from intracellular chrysolaminaran and not extracellular polysaccharides (2004) European Journal of Phycology, 39, pp. 117-128 
504 |a Ciucanu, I., Kerek, F., A simple and rapid method for the permethylation of carbohydrates (1984) Carbohydrate Research, 131, pp. 209-217 
504 |a Daglio, Y., Maidana, N.I., Matulewicz, M.C., Rodríguez, M.C., Changes in motility and induction of enzymatic activity by nitrogen and phosphate deficiency in benthic Halamphora luciae (Bacillariophyceae) from Argentina (2016) Phycologia, 55, pp. 493-505 
504 |a Danielewicz, M.A., Anderson, L.A., Franz, A.K., Triacylglycerol profiling of marine microalgae by mass spectrometry (2011) Journal of Lipid Research, 52, pp. 2101-2118 
504 |a De Bruyne, K., Slabbinck, B., Waegeman, W., Vauterin, P., De Baets, B., Vandamme, P., Bacterial species identification from MALDI-TOF mass spectra through data analysis and machine learning (2011) Systematic and Applied Microbiology, 34, pp. 20-29 
504 |a Di Rienzo, J.A., Casanoves, F., Balzarini, M.G., González, L., Tablada, M., Robledo, C.W., (2014) Grupo InfoStat, FCA, Universidad Nacional de Córdoba, Argentina, , http://www.infostat.com.ar 
504 |a Emami, K., Hack, E., Nelson, A., Brain, C.M., Lyne, F.M., Mesbahi, E., (2015) Proteomic-based biotyping reveals hidden diversity within a microalgae culture collection: an example using Dunaliella. Scientific Reports, 5, pp. 2-15 
504 |a Field, C.B., Behrenfeld, M.J., Randerson, J.T., Falkowski, P., Primary production of the biosphere: integrating terrestrial and oceanic components (1998) Science, 281, pp. 237-240 
504 |a Giebel, R., Worden, C., Rust, S.M., Kleinheinz, G.T., Robbins, M., Microbial fingerprinting using matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS): applications and challenges (2010) Advances in Applied Microbiology, 71, pp. 149-184 
504 |a Granum, E., Kirkvold, S., Myklestad, S.M., Cellular and extracellular production of carbohydrates and amino acids by the marine diatom Skeletonema costatum: diel variations and effects of N depletion (2002) Marine Ecology Progress Series, 242, pp. 83-94 
504 |a Gügi, B., Le Costaouec, T., Burel, C., Lerouge, P., Helbert, W., Bardor, M., Diatom-specific oligosaccharide and polysaccharide structures help to unravel biosynthetic capabilities in diatoms (2015) Marine Drugs, 13, pp. 5993-6018 
504 |a Guillard, R.R.L., Culture of phytoplankton for feeding marine invertebrates (1975) Animals, pp. 26-60. , Smith W.L., Chanley M.H., (eds), Plenum Press, New York, NY:. Culture of Marine Invertebrate, editors 
504 |a Hildebrand, M., Manandhar-Shrestha, K., Abbriano, R., Effects of chrysolaminarin synthase knockdown in the diatom Thalassiosira pseudonana: implications of reduced carbohydrate storage relative to green algae (2017) Algal Research, 23, pp. 66-77 
504 |a Hockin, N.L., Mock, T., Mulholland, F., Kopriva, S., Malin, G., The response of diatom central carbon metabolism to nitrogen starvation is different from that of green algae and higher plants (2012) Plant Physiology, 158, pp. 299-312 
504 |a Jallet, D., Caballero, M.A., Gallina, A.A., Youngblood, M., Peers, G., Photosynthetic physiology and biomass partitioning in the model diatom Phaeodactylum tricornutum grown in a sinusoidal light regime (2016) Algal Research, 18, pp. 51-60 
504 |a Ju, Z., Ding, L., Zheng, Q., Wu, Z., Zheng, F., Diatoms as a model system in studying lipid biosynthesis regulation (2011) International Journal of Environmental Science and Development, 2, pp. 493-495 
504 |a Kim, H.S., Hong, J.T., Kim, Y., Han, S., Stimulatory effect of β-glucans on immune cells (2011) Immune Network, 11, pp. 191-195 
504 |a Knoshaug, E.P., Darzins, A., Algal biofuels: the process (2011) Chemical Engineering Progress, 107, pp. 37-47 
504 |a Krishnamurthy, K.V., Fluorescence microscopic cytochemistry (1999) Methods in Cell Wall Cytochemistry (Krishnamurthy, K.V., editor), pp. 151-176. , CRC Press, Boca Raton, Florida 
504 |a Le Costaouec, T., Unamunzaga, C., Mantecon, L., Helbert, W., (2017) New structural insights into the cell-wall polysaccharide of the diatom Phaeodactylum tricornutum. Algal Research, 26, pp. 172-179 
504 |a Levitan, O., Dinamarca, J., Zelzion, E., Lun, D., Guerra, L.T., Kim, M.K., Kim, J., Falkowski, P., Remodeling of intermediate metabolism in the diatom Phaeodactylum tricornutum under nitrogen stress (2015) Proceedings of the National Academy of Sciences USA, 112, pp. 412-417 
504 |a Liang, J.R., Ai, X.X., Gao, Y.H., Chen, C.P., (2013) MALDI-TOF MS analysis of the extracellular polysaccharides released by the diatom Thalassiosira pseudonana. Journal of Applied Phycology, 25, pp. 477-484 
504 |a Martín, L.A., Popovich, C.A., Martinez, A.M., Damiani, M.C., Leonardi, P.I., Oil assessment of Halamphora coffeaeformis diatom growing in a hybrid two-stage system for biodiesel production (2016) Renewable Energy, 92, pp. 127-135 
504 |a McConville, M.J., Bacic, A., Clarke, A.E., Structural studies of chrysolaminaran from the ice diatom Stauroneis amphioxys (Gregory) (1986) Carbohydrate Research, 153, pp. 330-333 
504 |a Myklestad, S., Production, chemical structure, metabolism, and biological function of the (1→3)-Linked, β 3-D-glucans in diatoms (1989) Biological Oceanography, 6, pp. 313-326 
504 |a Nelson, D.M., Tréguer, P., Brzezinski, M.A., Leynaert, A., Quéguiner, B., Production and dissolution of biogenic silica in the ocean: revised global estimates, comparison with regional data and relationship to biogenic sedimentation (1995) Global Biogeochemical Cycles, 9, pp. 359-372 
504 |a Ng, W., Teaching microbial identification with matrix-assisted laser desorption/ionization time-of flight mass spectrometry (MALDI-TOF MS) and bioinformatics tools (2013) Journal of Microbiology & Biology Education, 14, pp. 103-106 
504 |a Nicolau, A., Santos, L., Santos, C., Mota, M., Matrix assisted laser desorption/ionisation time of flight mass spectrometry (MALDI-TOF-MS) applied to diatom identification: influence of culturing age (2014) Aquatic Biology, 20, pp. 139-144 
504 |a Nonami, H., Fukui, S., Erra-Balsells, R., β-carbolinealkaloids as matrices for matrix-assisted ultraviolet laser desorption time-of-flight mass spectrometry of proteins and sulfated oligosaccharides: a comparative study using phenylcarbonyl compounds, carbazoles and classical matrices (1997) Journal of Mass Spectrometry, 32, pp. 287-296 
504 |a Obata, T., Fernie, A.R., Nunes-Nesi, A., The central carbon and energy metabolism of marine diatoms (2013) Metabolites, 3, pp. 325-346 
504 |a Packeu, A., Hendrickx, M., Beguin, H., Martiny, D., Vandenberg, O., Detandt, M., Identification of the Trichophyton mentagrophytes complex species using MALDI-TOF mass spectrometry (2013) Medical Mycology, 51, pp. 580-585 
504 |a Paulsen, B.S., Myklestad, S., Structural studies of the reserve glucan produced by the marine diatom Skeletonema costatum (Grev.) Cleve (1978) Carbohydrate Research, 62, pp. 386-388 
504 |a Pavlovic, M., Mewes, A., Maggipinto, M., Schmidt, W., Messelhausser, U., Balsliemke, J., MALDI-TOF-MS based identification of food-borne yeast isolates (2014) Journal of Microbiological Methods, 106, pp. 123-128 
504 |a Sandrin, T.R., Goldstein, J.E., Schumaker, S., MALDI-TOF MS profiling of bacteria at the strain level: a review (2013) Mass Spectrometry Review, 32, pp. 188-217 
504 |a Shea, E.M., Carpita, N.C., Separation of partially methylated alditol acetates on SP-2330 and HP-1 vitreous silica capillary columns (1988) Journal of Chromatography, 445, pp. 424-428 
504 |a Smith, V.H., Crews, T., Applying ecological principles of crop cultivation in large-scale algal biomass production (2014) Algal Research, 4, pp. 23-34 
504 |a Stone, B., Callose and related glucans (2006) Encyclopedia of Life Sciences 
504 |a Storseth, T.R., Kirkvold, S., Skjermo, J., Reitan, K., A branched β-d-(1→3, 1→6)-glucan from the marine diatom Chaetoceros debilis (Bacillariophyceae) characterized by NMR (2006) Carbohydrate Research, 341, pp. 2108-2114 
504 |a Sumper, M., Lehmann, G., Silica pattern formation in diatoms: species-specific polyamine biosynthesis (2006) ChemBioChem, 7, pp. 1419-1427 
504 |a Sumper, M., Brunner, E., Lehmann, G., Biomineralization in diatoms: characterization of novel polyamines associated with silica (2005) FEBS Letters, 579, pp. 3765-3769 
504 |a Sumper, M., Hett, R., Lehmann, G., Wenzl, S., A code for lysine modifications of a silica biomineralizing silaffin protein (2007) Angewandte Chemie, 46, pp. 8405-8408 
504 |a Suzuki, T., Midonoya, H., Shioi, Y., Analysis of chlorophylls and their derivatives by matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry (2009) Analytical Biochemistry, 390, pp. 57-62 
504 |a Takahashi, E., Ledauphin, J., Goux, D., Orvain, F., Optimising extraction of extracellular polymeric substances (EPS) from benthic diatoms: comparison of the efficiency of six EPS extraction methods (2009) Marine and Freshwater Research, 60, pp. 1201-1210 
504 |a Tesson, B., Hildebrand, M., Characterization and localization of insoluble organic matrices associated with diatom cell walls: insight into their roles during cell wall formation (2013) PLoS ONE, 8 (4) 
504 |a Tréguer, P., Bowler, C., Moriceau, B., Dutkiewicz, S., Gehlen, M., Aumont, O., Bittner, L., Pondaven, P., Influence of diatom diversity on the ocean biological carbon pump (2017) Nature Geoscience, 11, pp. 27-37 
504 |a Vieler, A., Wilhelm, C., Goss, R., Süß, R., Schiller, J., The lipid composition of the unicellular green alga Chlamydomonas reinhardtii and the diatom Cyclotella meneghiniana investigated by MALDI-TOF MS and TLC (2007) Chemistry and Physics of Lipids, 150, pp. 143-155 
504 |a Waterkeyn, L., Bienfait, A., Localization and function of beta 1,3-glucans (callose and chrysolaminarin) in Pinnularia genus (Diatoms) (1987) Cellule, 74, pp. 199-226 
504 |a Wilhelm, C., Büchel, C., Fisahn, J., Goss, R., Jakob, T., Laroche, J., Lavaud, J., Kroth, P.G., The regulation of carbon and nutrient assimilation in diatoms is significantly different from green algae (2006) Protist, 157, pp. 91-124 
504 |a Xia, S., Gao, B., Li, A., Xiong, J., Ao, Z., Zhang, C., (2014) Preliminary characterization, antioxidant properties and production of chrysolaminarin from marine diatom Odontella aurita. Marine Drugs, 12, pp. 4883-4897 
504 |a Young, R.J., Lovell, P.A., (1991) Introduction to Polymers, , 2nd, Cambridge University Press, Cambridge, &, edition 
504 |a Zhang, H., Wang, D.Z., Xie, Z.X., Zhang, S.F., Wang, M.H., Lin, L., Comparative proteomics reveals highly and differentially expressed proteins in field-collected and laboratory-cultured blooming cells of the diatom Skeletonema costatum (2015) Environmental Microbiology, 17, pp. 3976-3991 
520 3 |a The effects of N and P depletion on the production and structural characterization of the cellular carbohydrate polymers of the estuarine diatom Halamphora luciae in batch culture were examined using matrix-assisted laser desorption-ionization time-of flight mass spectrometry (MALDI-TOF MS) complemented with monosaccharide composition determination and structural analyses by methylation of aqueous extracted product. The MALDI MS analysis of the cells showed a similar profile in control and N- and P-depleted media, with a displacement to higher molecular weight for cells grown in depleted media. In the monosaccharide analyses, both nutrient depletion and culture ageing led to an increase in glucose content, indicating that MALDI-TOF MS in whole cells was detecting the changes in chrysolaminarin. The maxima for the ions from f/2-P and to a lesser extent in f/2-N were displaced to higher m/z values indicating a higher degree of polymerization (DP). Methylation analysis confirmed the presence of chrysolaminarin, a (1→3)-β-d-glucan with branching in C2 and C6, where the glucan backbone had a substitution every four glucose residues. The (1→3)-β-d-glucan was also detected in the cingule by fluorescence with aniline blue. © 2018, © 2018 British Phycological Society.  |l eng 
536 |a Detalles de la financiación: National Council for Scientific Research 
536 |a Detalles de la financiación: Agencia Nacional de Promoción Científica y Tecnológica, PME 125 
536 |a Detalles de la financiación: Consejo Nacional de Investigaciones Científicas y Técnicas 
536 |a Detalles de la financiación: 0055BA] and CONICET [PIP 11220080100234, PIP 11220110100208 and PIP 0072CO] and ANPCyT [PICT 2012-0888]. The MALDI Ultraflex II (Bruker) TOF/TOF mass spectrometer was supported by a grant from ANPCYT, PME 125 (CEQUIBIEM, FCEN, UBA). YD is a Research Fellow of the National Research Council of Argentina (CONICET) and MLS, MCM and REB are research members of the same institution. 
593 |a Universidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigación en Hidratos de Carbono (CIHIDECAR), Facultad de Ciencias Exactas y Naturales Pabellón II, 3er P, Ciudad Universitaria, Buenos Aires, 1428, Argentina 
593 |a Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Orgánica, Pabellón II, 3er P., Ciudad Universitaria, Buenos Aires, 1428, Argentina 
593 |a Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Biodiversidad y Biología Experimental, Ciudad Universitaria-Pabellón 2, Buenos Aires, C1428EGA, Argentina 
690 1 0 |a CELLULAR CARBOHYDRATE POLYMERS 
690 1 0 |a CHRYSOLAMINARIN 
690 1 0 |a DIATOM CELLS 
690 1 0 |a HALAMPHORA LUCIAE 
690 1 0 |a MALDI-TOF MS 
690 1 0 |a NUTRIENT STRESS 
690 1 0 |a AQUEOUS SOLUTION 
690 1 0 |a CARBOHYDRATE 
690 1 0 |a CELL 
690 1 0 |a DIATOM 
690 1 0 |a GLUCOSE 
690 1 0 |a MASS SPECTROMETRY 
690 1 0 |a METHYLATION 
690 1 0 |a MOLECULAR ANALYSIS 
690 1 0 |a NITROGEN 
690 1 0 |a NUTRIENT LOSS 
690 1 0 |a PHOSPHORUS 
690 1 0 |a POLYMER 
690 1 0 |a POLYMERIZATION 
690 1 0 |a POLYSACCHARIDE 
690 1 0 |a BACILLARIOPHYCEAE 
690 1 0 |a BACILLARIOPHYTA 
700 1 |a Salum, M.L. 
700 1 |a Rodríguez, M.C. 
700 1 |a Erra-Balsells, R. 
700 1 |a Matulewicz, M.C. 
773 0 |d Taylor and Francis Ltd., 2018  |g v. 53  |h pp. 422-432  |k n. 3  |p Eur. J. Phycol.  |x 09670262  |w (AR-BaUEN)CENRE-4679  |t European Journal of Phycology 
856 4 1 |u https://www.scopus.com/inward/record.uri?eid=2-s2.0-85049651213&doi=10.1080%2f09670262.2018.1458336&partnerID=40&md5=36ccba87a6d99bd8925750d0f62f91fd  |y Registro en Scopus 
856 4 0 |u https://doi.org/10.1080/09670262.2018.1458336  |y DOI 
856 4 0 |u https://hdl.handle.net/20.500.12110/paper_09670262_v53_n3_p422_Daglio  |y Handle 
856 4 0 |u https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_09670262_v53_n3_p422_Daglio  |y Registro en la Biblioteca Digital 
961 |a paper_09670262_v53_n3_p422_Daglio  |b paper  |c PE 
962 |a info:eu-repo/semantics/article  |a info:ar-repo/semantics/artículo  |b info:eu-repo/semantics/publishedVersion 
999 |c 86100