The benefits of analysing complete mitochondrial genomes: Deep insights into the phylogeny and population structure of Echinococcus granulosus sensu lato genotypes G6 and G7

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Cystic echinococcosis (CE) is a zoonotic disease caused by the larval stage of the species complex Echinococcus granulosus sensu lato. Within this complex, genotypes G6 and G7 have been frequently associated with human CE worldwide. Previous studies exploring the genetic variability and phylogeograp...

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Autor principal: Laurimäe, T.
Otros Autores: Kinkar, L., Romig, T., Omer, R.A, Casulli, A., Umhang, G., Gasser, R.B, Jabbar, A., Sharbatkhori, M., Mirhendi, H., Ponce-Gordo, F., Lazzarini, L.E, Soriano, S.V, Varcasia, A., Rostami Nejad, M., Andresiuk, V., Maravilla, P., González, L.M, Dybicz, M., Gawor, J., Šarkūnas, M., Šnábel, V., Kuzmina, T., Saarma, U.
Formato: Capítulo de libro
Lenguaje:Inglés
Publicado: Elsevier B.V. 2018
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Biblioteca Central Dr. Luis F. Leloir (FCEN) de Universidad de Buenos Aires
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100 1 |a Laurimäe, T. 
245 1 4 |a The benefits of analysing complete mitochondrial genomes: Deep insights into the phylogeny and population structure of Echinococcus granulosus sensu lato genotypes G6 and G7 
260 |b Elsevier B.V.  |c 2018 
270 1 0 |m Saarma, U.; Department of Zoology, Institute of Ecology and Earth Sciences, University of Tartu, Vanemuise 46, Estonia; email: Urmas.Saarma@ut.ee 
506 |2 openaire  |e Política editorial 
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520 3 |a Cystic echinococcosis (CE) is a zoonotic disease caused by the larval stage of the species complex Echinococcus granulosus sensu lato. Within this complex, genotypes G6 and G7 have been frequently associated with human CE worldwide. Previous studies exploring the genetic variability and phylogeography of genotypes G6 and G7 have been based on relatively short mtDNA sequences, and the resolution of these studies has often been low. Moreover, using short sequences, the distinction between G6 and G7 has in some cases remained challenging. The aim here was to sequence complete mitochondrial genomes (mitogenomes) to obtain deeper insight into the genetic diversity, phylogeny and population structure of genotypes G6 and G7. We sequenced complete mitogenomes of 94 samples collected from 15 different countries worldwide. The results demonstrated that (i) genotypes G6 and G7 can be clearly distinguished when mitogenome sequences are used; (ii) G7 is represented by two major haplogroups, G7a and G7b, the latter being specific to islands of Corsica and Sardinia; (iii) intensive animal trade, but also geographical isolation, have likely had the largest impact on shaping the genetic structure and distribution of genotypes G6 and G7. In addition, we found phylogenetically highly divergent haplotype from Mongolia (Gmon), which had a higher affinity to G6. © 2018 Elsevier B.V.  |l eng 
536 |a Detalles de la financiación: Seventh Framework Programme, 602051 
536 |a Detalles de la financiación: This work was supported by institutional research funding ( IUT20-32 ) from the Estonian Ministry of Education and Research , and the Estonian Doctoral School of Ecology and Environmental Sciences. The research that has led to these results has been also partially supported by the European Community's Seventh Framework Programme under the grant agreement 602051 , Project HERACLES; http://www.Heracles-fp7.eu/ . Appendix A 
593 |a Department of Zoology, Institute of Ecology and Earth Sciences, University of Tartu, Vanemuise 46, Tartu, 51003, Estonia 
593 |a Institute of Zoology, Parasitology Unit, University of Hohenheim, Stuttgart, 70599, Germany 
593 |a National University Research Institute, National University Sudan, Khartoum, Sudan 
593 |a World Health Organization Collaborating Centre for the Epidemiology, Detection and Control of Cystic and Alveolar Echinococcosis (in humans and animals), Istituto Superiore di Sanità, Viale Regina Elena 299, Rome, 00161, Italy 
593 |a European Union Reference Laboratory for Parasites (EURLP), Istituto Superiore di Sanità, Viale Regina Elena 299, Rome, 00161, Italy 
593 |a Anses, Wildlife Surveillance and Eco-epidemiology Unit, National Reference Laboratory for Echinococcus spp., Nancy Laboratory for Rabies and Wildlife, Malzéville, 54220, France 
593 |a Department of Veterinary Biosciences, Melbourne Veterinary School, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, Victoria 3010, Australia 
593 |a Laboratory Science Research Center, Golestan University of Medical Sciences, Gorgan, Iran 
593 |a Department of Parasitology and Mycology, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran 
593 |a Department of Parasitology, Faculty of Pharmacy, Complutense University, Plaza Ramón y Cajal s/n, Madrid, 28040, Spain 
593 |a Department of Microbiology and Parasitology, Faculty of Medical Sciences, Comahue National University, 1400, Neuquén, Buenos Aires, 8300, Argentina 
593 |a Laboratorio di Parassitologia e Malattie Parassitarie, Ospedale Didattico Veterinario Dipartimento di Medicina Veterinaria, Università degli Studi di Sassari, Via Vienna 2, Sassari, 07100, Italy 
593 |a Gastroenterology and Liver Diseases Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran 
593 |a Laboratorio de Zoonosis Parasitarias, FCEyN, UNMdP, Funes 3350, Mar del Plata, Buenos Aires, 7600, Argentina 
593 |a Hospital General “Dr. Manuel Gea Gonzalez”, Departamento de Ecologia de Agentes PatogenosDF 14080, Mexico 
593 |a Parasitology Department, Centro Nacional de Microbiologia, Instituto de Salud Carlos III, Majadahonda, Madrid, 28220, Spain 
593 |a Department of General Biology and Parasitology, Medical University of Warsaw, 5 Chałubińskiego Str., Warsaw, 02-004, Poland 
593 |a W. Stefański Institute of Parasitology, Polish Academy of Science, Twarda51/55, Warsaw, 00-818, Poland 
593 |a Department of Veterinary Pathobiology, Veterinary Academy, Lithuanian University of Health Sciences, Tilžes Street 18, Kaunas, 47181, Lithuania 
593 |a Institute of Parasitology, Slovak Academy of Sciences, Košice, Hlinkova 3, Košice, 040 01, Slovakia 
593 |a I.I. Schmalhausen Institute of Zoology, National Academy of Sciences of Ukraine, Kyiv, 01030, Ukraine 
690 1 0 |a CYSTIC ECHINOCOCCOSIS 
690 1 0 |a GENOTYPE G6 
690 1 0 |a GENOTYPE G7 
690 1 0 |a HYDATID DISEASE 
690 1 0 |a MITOCHONDRIAL GENOME 
690 1 0 |a ZOONOSIS 
690 1 0 |a CYCLOOXYGENASE 1 
690 1 0 |a ARTICLE 
690 1 0 |a BINDING AFFINITY 
690 1 0 |a CORSICA 
690 1 0 |a ECHINOCOCCUS GRANULOSUS 
690 1 0 |a ECHINOCOCCUS GRANULOSUS SENSU LATO 
690 1 0 |a GENE SEQUENCE 
690 1 0 |a GENE STRUCTURE 
690 1 0 |a GENETIC VARIABILITY 
690 1 0 |a GENETIC VARIATION 
690 1 0 |a GENOTYPE 
690 1 0 |a GEOGRAPHIC MAPPING 
690 1 0 |a GEOGRAPHY 
690 1 0 |a HAPLOTYPE 
690 1 0 |a HUMAN 
690 1 0 |a LIFE CYCLE 
690 1 0 |a MITOCHONDRIAL GENOME 
690 1 0 |a NONHUMAN 
690 1 0 |a PHYLOGENY 
690 1 0 |a POPULATION DIFFERENTIATION 
690 1 0 |a POPULATION STRUCTURE 
690 1 0 |a PRIORITY JOURNAL 
690 1 0 |a SARDINIA 
690 1 0 |a SEQUENCE ANALYSIS 
651 4 |a MONGOLIA 
700 1 |a Kinkar, L. 
700 1 |a Romig, T. 
700 1 |a Omer, R.A. 
700 1 |a Casulli, A. 
700 1 |a Umhang, G. 
700 1 |a Gasser, R.B. 
700 1 |a Jabbar, A. 
700 1 |a Sharbatkhori, M. 
700 1 |a Mirhendi, H. 
700 1 |a Ponce-Gordo, F. 
700 1 |a Lazzarini, L.E. 
700 1 |a Soriano, S.V. 
700 1 |a Varcasia, A. 
700 1 |a Rostami Nejad, M. 
700 1 |a Andresiuk, V. 
700 1 |a Maravilla, P. 
700 1 |a González, L.M. 
700 1 |a Dybicz, M. 
700 1 |a Gawor, J. 
700 1 |a Šarkūnas, M. 
700 1 |a Šnábel, V. 
700 1 |a Kuzmina, T. 
700 1 |a Saarma, U. 
773 0 |d Elsevier B.V., 2018  |g v. 64  |h pp. 85-94  |p Infec. Genet. Evol.  |x 15671348  |w (AR-BaUEN)CENRE-5137  |t Infection, Genetics and Evolution 
856 4 1 |u https://www.scopus.com/inward/record.uri?eid=2-s2.0-85048900987&doi=10.1016%2fj.meegid.2018.06.016&partnerID=40&md5=2f132a4bf11b6556ec136108dc700f44  |y Registro en Scopus 
856 4 0 |u https://doi.org/10.1016/j.meegid.2018.06.016  |y DOI 
856 4 0 |u https://hdl.handle.net/20.500.12110/paper_15671348_v64_n_p85_Laurimae  |y Handle 
856 4 0 |u https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_15671348_v64_n_p85_Laurimae  |y Registro en la Biblioteca Digital 
961 |a paper_15671348_v64_n_p85_Laurimae  |b paper  |c PE 
962 |a info:eu-repo/semantics/article  |a info:ar-repo/semantics/artículo  |b info:eu-repo/semantics/publishedVersion 
999 |c 86011 

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