Discrimination of closely related species in tintinnid ciliates: New insights on crypticity and polymorphism in the genus helicostomella

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This study focuses on the utility of molecular markers for the discrimination of closely related species in tintinnid ciliates. We analyzed the ecologically important genus Helicostomella by sequencing part of the large-subunit rDNA (LSU rDNA) and the 5.8S rDNA combined with the internally transcrib...

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Autor principal: Santoferrara, L.F
Otros Autores: Tian, M., Alder, Viviana Andrea, McManus, G.B
Formato: Capítulo de libro
Lenguaje:Inglés
Publicado: Elsevier GmbH 2015
Acceso en línea:Registro en Scopus
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Biblioteca Central Dr. Luis F. Leloir (FCEN) de Universidad de Buenos Aires
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024 7 |2 scopus  |a 2-s2.0-84952322862 
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024 7 |2 cas  |a DNA, Protozoan; DNA, Ribosomal; DNA, Ribosomal Spacer; RNA, Ribosomal; RNA, ribosomal, 26S; RNA, Ribosomal, 5.8S 
030 |a PROTF 
040 |a Scopus  |b spa  |c AR-BaUEN  |d AR-BaUEN 
100 1 |a Santoferrara, L.F. 
245 1 0 |a Discrimination of closely related species in tintinnid ciliates: New insights on crypticity and polymorphism in the genus helicostomella 
260 |b Elsevier GmbH  |c 2015 
270 1 0 |m Santoferrara, L.F.; Department of Marine Sciences, University of Connecticut, 1080 Shennecossett Rd., United States 
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506 |2 openaire  |e Política editorial 
520 3 |a This study focuses on the utility of molecular markers for the discrimination of closely related species in tintinnid ciliates. We analyzed the ecologically important genus Helicostomella by sequencing part of the large-subunit rDNA (LSU rDNA) and the 5.8S rDNA combined with the internally transcribed spacer regions 1 and 2 (5.8S rDNA-ITS) from forty-five individuals collected in NW and SW Atlantic waters and after culturing. Although all described Helicostomella species represent a continuum of morphologies, forms with shorter or longer loricae would correspond to different species according to previous molecular data. Here we observed that long forms show both crypticity (i.e. two almost identical long forms with different DNA sequences) and polymorphism (i.e. some long forms develop significantly shorter loricae after culturing). Reviewing all available tintinnid sequences, we found that 1) three Helicostomella clusters are consistent with different species from a molecular perspective, although these clusters are neither clearly differentiated by their loricae nor unambiguously linked to described species, 2) Helicostomella is closely related (probably to the family or genus level) to four ". Tintinnopsis-like" morphospecies, and 3) if considered separately, neither LSU rDNA nor 5.8S rDNA-ITS completely discriminate closely related species, thus supporting the use of multi-gene barcodes for tintinnids. © 2014 Elsevier GmbH.  |l eng 
536 |a Detalles de la financiación: Agencia Nacional de Promoción Científica y Tecnológica, PICT-O-2010-0128 
536 |a Detalles de la financiación: University of Connecticut, UCONN 
536 |a Detalles de la financiación: OCE 0648711 
536 |a Detalles de la financiación: Financial support was received from the US National Science Foundation (OCE 0648711), University of Connecticut, and Agencia Nacional de Promoción Científica y Tecnológica, Argentina (PICT-O-2010-0128). Appendix A 
593 |a Department of Marine Sciences, University of Connecticut, 1080 Shennecossett Rd., Groton, CT 06340, United States 
593 |a Instituto de Ecología, Genética y Evolución de Buenos Aires (IEGEBA, UBA-CONICET) and Departamento de Ecología, Genética y Evolución, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, C1428EHA, Argentina 
593 |a Instituto Antártico Argentino, Dirección Nacional del Antártico, Balcarce, Buenos Aires, 290 C1010AAZ, Argentina 
690 1 0 |a CLOSELY RELATED SPECIES 
690 1 0 |a CRYPTIC SPECIES 
690 1 0 |a DNA BARCODING 
690 1 0 |a MOLECULAR MARKERS 
690 1 0 |a POLYMORPHIC SPECIES 
690 1 0 |a TINTINNID CILIATE 
690 1 0 |a CILIOPHORA 
690 1 0 |a HELICOSTOMELLA 
690 1 0 |a TINTINNIDA 
690 1 0 |a TINTINNOPSIS 
690 1 0 |a PROTOZOAL DNA 
690 1 0 |a RIBOSOMAL SPACER DNA 
690 1 0 |a RIBOSOME DNA 
690 1 0 |a RIBOSOME RNA 
690 1 0 |a RNA 5.8S 
690 1 0 |a RNA, RIBOSOMAL, 26S 
690 1 0 |a SEA WATER 
690 1 0 |a ATLANTIC OCEAN 
690 1 0 |a CHEMISTRY 
690 1 0 |a CILIATE 
690 1 0 |a CLASSIFICATION 
690 1 0 |a CLUSTER ANALYSIS 
690 1 0 |a CYTOLOGY 
690 1 0 |a DNA SEQUENCE 
690 1 0 |a GENETIC VARIABILITY 
690 1 0 |a GENETICS 
690 1 0 |a MICROSCOPY 
690 1 0 |a MOLECULAR GENETICS 
690 1 0 |a PARASITOLOGY 
690 1 0 |a PHYLOGENY 
690 1 0 |a ATLANTIC OCEAN 
690 1 0 |a CILIOPHORA 
690 1 0 |a CLUSTER ANALYSIS 
690 1 0 |a DNA, PROTOZOAN 
690 1 0 |a DNA, RIBOSOMAL 
690 1 0 |a DNA, RIBOSOMAL SPACER 
690 1 0 |a GENETIC VARIATION 
690 1 0 |a MICROSCOPY 
690 1 0 |a MOLECULAR SEQUENCE DATA 
690 1 0 |a PHYLOGENY 
690 1 0 |a RNA, RIBOSOMAL 
690 1 0 |a RNA, RIBOSOMAL, 5.8S 
690 1 0 |a SEAWATER 
690 1 0 |a SEQUENCE ANALYSIS, DNA 
700 1 |a Tian, M. 
700 1 |a Alder, Viviana Andrea 
700 1 |a McManus, G.B. 
773 0 |d Elsevier GmbH, 2015  |g v. 166  |h pp. 78-92  |k n. 1  |x 14344610  |t Protist 
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856 4 0 |u https://doi.org/10.1016/j.protis.2014.11.005  |y DOI 
856 4 0 |u https://hdl.handle.net/20.500.12110/paper_14344610_v166_n1_p78_Santoferrara  |y Handle 
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999 |c 74511 

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