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Force fields
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AMBER
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2Materias: “...AMBER force-field...”
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3Materias: “...AMBER...”
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4“... calculations on short aliphatic chains model systems were included in the generalized AMBER force field...”
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5por Robaldo, L., Pontiggia, R., Di Lella, S., Estrin, D.A., Engels, J.W., Iribarren, A.M., Montserrat, J.M.“... simulations using AMBER were carried out in order to gain structural knowledge about the effect of the 2′-C...”
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6“... in the computationally efficient program SIESTA, while the environment is treated using the Wang et al. Amber force field...”
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7“... that are reasonably similar to each other, whereas the older parameterizations for Amber, charmm or OPLS were more...”
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8“... the solvated protein environment was modeled using the Amber force field. Our results indicate that nitrite...”
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9“... employing Gaussian basis functions, and incorporates the Amber force-field in the QM-MM treatment. The most...”
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10“... with the Generalized Amber Force Field (GAFF) and TIP4P/2005 water. The parametrization weighs multiple properties...”
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